RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 FSTL4Q6MZW2 842 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 NLRP9Q7RTR0 991 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 ZNF784Q8NCA9 323 aaPredicted RBP19.7■□□□□ 0.74
HOXC4-201ENST00000303406 GPR22Q99680 433 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 MAGEH1Q9H213 219 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 RHOJQ9H4E5 214 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 NPHS2Q9NP85 383 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 NT5MQ9NPB1 228 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 IARS2Q9NSE4 1012 aaKnown RBP19.7■□□□□ 0.74
HOXC4-201ENST00000303406 TXLNGQ9NUQ3 528 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 ANKRD6Q9Y2G4 727 aa19.7■□□□□ 0.74
HOXC4-201ENST00000303406 HEATR9A2RTY3 570 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 PMPCBO75439 489 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 RASSF9O75901 435 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 SEC24AO95486 1093 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 GSRP00390 522 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 PROCP04070 461 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 ATP5BP06576 529 aaKnown RBP19.69■□□□□ 0.74
HOXC4-201ENST00000303406 OR1E1P30953 314 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 ARCN1P48444 511 aaKnown RBP19.69■□□□□ 0.74
HOXC4-201ENST00000303406 CDH4P55283 916 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 TMPRSS15P98073 1019 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 SLC10A7Q0GE19 358 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 BST1Q10588 318 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 ILF2Q12905 390 aaKnown RBP19.69■□□□□ 0.74
HOXC4-201ENST00000303406 RAB33AQ14088 237 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 TTC31Q49AM3 519 aaPredicted RBP19.69■□□□□ 0.74
HOXC4-201ENST00000303406 RABGAP1LQ5R372 815 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 ALG1LQ6GMV1 187 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 CCDC91Q7Z6B0 441 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 CLEC14AQ86T13 490 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 GABPB2Q8TAK5 448 aaPredicted RBP19.69■□□□□ 0.74
HOXC4-201ENST00000303406 PSMG2Q969U7 264 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 TMEM169Q96HH4 297 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 ZNF512Q96ME7 567 aaPredicted RBP19.69■□□□□ 0.74
HOXC4-201ENST00000303406 AGAP2Q99490 1192 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 SIKE1Q9BRV8 207 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 ECT2Q9H8V3 914 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 STK39Q9UEW8 545 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 YIPF1Q9Y548 306 aa19.69■□□□□ 0.74
HOXC4-201ENST00000303406 CHD5Q8TDI0 1954 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 DNAJC6O75061 913 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 MMP2P08253 660 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 RPL17P18621 184 aaKnown RBP19.68■□□□□ 0.74
HOXC4-201ENST00000303406 ALDH1A3P47895 512 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 KCNQ1P51787 676 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 ARFIP2P53365 341 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 LBRQ14739 615 aaKnown RBP19.68■□□□□ 0.74
HOXC4-201ENST00000303406 VEPH1Q14D04 833 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 CHI3L2Q15782 390 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 CHST9Q7L1S5 443 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 LGI2Q8N0V4 545 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 ARRDC2Q8TBH0 407 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 PABPC5Q96DU9 382 aaKnown RBP19.68■□□□□ 0.74
HOXC4-201ENST00000303406 VPS39Q96JC1 886 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 FAM167BQ9BTA0 163 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 MYLK2Q9H1R3 596 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 PDFQ9HBH1 243 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 THAP1Q9NVV9 213 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 IL1RAPL1Q9NZN1 696 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 MID2Q9UJV3 735 aa19.68■□□□□ 0.74
HOXC4-201ENST00000303406 HNRNPCL1O60812 293 aaKnown RBP19.67■□□□□ 0.74
HOXC4-201ENST00000303406 UNC5CO95185 931 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 LATS1O95835 1130 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 DLDP09622 509 aaKnown RBP19.67■□□□□ 0.74
HOXC4-201ENST00000303406 SERPINH1P50454 418 aaKnown RBP19.67■□□□□ 0.74
HOXC4-201ENST00000303406 LAMB3Q13751 1172 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 POU6F1Q14863 301 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 FASTKD1Q53R41 847 aaKnown RBP19.67■□□□□ 0.74
HOXC4-201ENST00000303406 KIAA0408Q6ZU52 694 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 DDX53Q86TM3 631 aaKnown RBP19.67■□□□□ 0.74
HOXC4-201ENST00000303406 ZC3HC1Q86WB0 502 aaKnown RBP19.67■□□□□ 0.74
HOXC4-201ENST00000303406 ERP27Q96DN0 273 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 DDX50Q9BQ39 737 aaKnown RBP19.67■□□□□ 0.74
HOXC4-201ENST00000303406 MECRQ9BV79 373 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 POLR1EQ9GZS1 481 aaKnown RBP19.67■□□□□ 0.74
HOXC4-201ENST00000303406 NACA2Q9H009 215 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 SLC40A1Q9NP59 571 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 SAR1AQ9NR31 198 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 KCNK4Q9NYG8 393 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 SPG21Q9NZD8 308 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 UXTQ9UBK9 157 aaPredicted RBP19.67■□□□□ 0.74
HOXC4-201ENST00000303406 GGT7Q9UJ14 662 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 ATP11BQ9Y2G3 1177 aa19.67■□□□□ 0.74
HOXC4-201ENST00000303406 LOC285095A0A1B0GVY8 99 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 COCHO43405 550 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 CLDN11O75508 207 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 EPOP01588 193 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 PRKCGP05129 697 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 APOA4P06727 396 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 ATXN8OSP0DMR3 200 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 COL6A2P12110 1019 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 GRK2P25098 689 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 CREMQ03060 361 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 STX3Q13277 289 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 MSLNQ13421 630 aaPredicted RBP19.66■□□□□ 0.74
HOXC4-201ENST00000303406 SPOUT1Q5T280 376 aaKnown RBP19.66■□□□□ 0.74
HOXC4-201ENST00000303406 FAM91A1Q658Y4 838 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 MBLAC2Q68D91 279 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 GALNT7Q86SF2 657 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms