RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 LRRC4BQ9NT99 713 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 OGDHLQ9ULD0 1010 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 POLD2P49005 469 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 LSM3P62310 102 aaKnown RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 BIKQ13323 160 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 UBAP2LQ14157 1087 aaKnown RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PACS2Q86VP3 889 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 TMEM169Q96HH4 297 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 CIPCQ9C0C6 399 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ZDHHC6Q9H6R6 413 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 NEK6Q9HC98 313 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 NDOR1Q9UHB4 597 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ANAPC2Q9UJX6 822 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PCDHGA10Q9Y5H3 936 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PRLRP16471 622 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 CCNA2P20248 432 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 IDH2P48735 452 aaKnown RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 IFI35P80217 286 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 MARC1Q5VT66 337 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 HTR3CQ8WXA8 447 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ATG4CQ96DT6 458 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 SEMA4AQ9H3S1 761 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 SEMA6BQ9H3T3 888 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 THAP1Q9NVV9 213 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 RRN3Q9NYV6 651 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 LRRC14BA6NHZ5 514 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 MGRN1O60291 552 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 NOS1APO75052 506 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 TFRCP02786 760 aaKnown RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 CYP4B1P13584 511 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 NR4A1P22736 598 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 F8A1P23610 371 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PDHA2P29803 388 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 NR2C2P49116 596 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 VBP1P61758 197 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 LAMTOR4Q0VGL1 99 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ZFP69Q49AA0 526 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ULK3Q6PHR2 472 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 RASSF6Q6ZTQ3 369 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 SLC41A1Q8IVJ1 513 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 FBXO16Q8IX29 292 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 TRPV3Q8NET8 790 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 TMEM176AQ96HP8 235 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 GGA3Q9NZ52 723 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 OPTCQ9UBM4 332 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 MOXD2PA6NHM9 499 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 CASTOR2A6NHX0 329 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 REM1O75628 298 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 FRG1Q14331 258 aaKnown RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PRAMEF18Q5VWM3 479 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 XRRA1Q6P2D8 792 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 RXFP2Q8WXD0 754 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 NELL1Q92832 810 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 TCEAL7Q9BRU2 100 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 DPP7Q9UHL4 492 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 TSPAN16Q9UKR8 245 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 MRPS7Q9Y2R9 242 aaKnown RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PRR36Q9H6K5 1346 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 MYH10P35580 1976 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ZMPSTE24O75844 475 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 CBX6O95503 412 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 URODP06132 367 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ALDH5A1P51649 535 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PLK1P53350 603 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 EPHB3P54753 998 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 GIT2Q14161 759 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 GNASQ5JWF2 1037 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 RBM44Q6ZP01 1051 aaKnown RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 EZH1Q92800 747 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 VCPIP1Q96JH7 1222 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 SLC4A5Q9BY07 1137 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 KIAA1683Q9H0B3 1180 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 APOL3O95236 402 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 SEC24AO95486 1093 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PROCP04070 461 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 CYP2A6P11509 494 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 NTSP30990 170 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PDK3Q15120 406 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 PRR5LQ6MZQ0 368 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF549Q6P9A3 640 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ZC3H7AQ8IWR0 971 aaKnown RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 SCUBE3Q8IX30 993 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF655Q8N720 491 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 SMYD1Q8NB12 490 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 LEMD2Q8NC56 503 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 RHBGQ9H310 441 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 KIAA1257Q9ULG3 409 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ACTL7BQ9Y614 415 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 GPR182O15218 404 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ITGA10O75578 1167 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 TCF4P15884 667 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 OR1E1P30953 314 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 HSF2Q03933 536 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 C1QBPQ07021 282 aaKnown RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 CCSAPQ6IQ19 270 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-201ENST00000298875 HHIPL2Q6UWX4 724 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 RNF19BQ6ZMZ0 732 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 FAM92BQ6ZTR7 304 aa5.62□□□□□ -1.51
CPSF2-201ENST00000298875 ITIH5Q86UX2 942 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms