RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TBL1YQ9BQ87 522 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 RNF38Q9H0F5 515 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 ALG13Q9NP73 1137 aaKnown RBP9.29□□□□□ -0.92
PDPN-201ENST00000294489 USH1CQ9Y6N9 552 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 MIA3Q5JRA6 1907 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 KLKB1P03952 638 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 HMBSP08397 361 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 ITGA2BP08514 1039 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 SPRP35270 261 aaPredicted RBP9.29□□□□□ -0.92
PDPN-201ENST00000294489 ADRA1AP35348 466 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 RENBPP51606 427 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 CDHR3Q6ZTQ4 885 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 OTOAQ7RTW8 1153 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 TFAP2DQ7Z6R9 452 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 IPMKQ8NFU5 416 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 SPATA22Q8NHS9 363 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 ADAMTS19Q8TE59 1207 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 TSSK1BQ9BXA7 367 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 FSD1LQ9BXM9 530 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 ENTPD7Q9NQZ7 604 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 SOX13Q9UN79 622 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 RWDD3Q9Y3V2 267 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 PRRG1O14668 218 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 TPH1P17752 444 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 UBE3AQ05086 875 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 HNRNPDQ14103 355 aaKnown RBP9.29□□□□□ -0.92
PDPN-201ENST00000294489 Q6ZNB5 142 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 CHST9Q7L1S5 443 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 ZNF354CQ86Y25 554 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 MFSD3Q96ES6 412 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 RPRD1AQ96P16 312 aaPredicted RBP9.29□□□□□ -0.92
PDPN-201ENST00000294489 PDFQ9HBH1 243 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 CHRAC1Q9NRG0 131 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 PCDH10Q9P2E7 1040 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 PRKAG2Q9UGJ0 569 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 ZCWPW2A0A1B0GU75 182 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 C2orf78A6NCI8 922 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 KLF11O14901 512 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 GLRA3O75311 464 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 DCTN3O75935 186 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 PAPLNO95428 1278 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 MT-CYBP00156 380 aaPredicted RBP9.28□□□□□ -0.92
PDPN-201ENST00000294489 HLA-DQB2P05538 268 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 ELF1P32519 619 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 IL10RBQ08334 325 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 SERINC3Q13530 473 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 SPRED3Q2MJR0 410 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 PABPC1LQ4VXU2 614 aaKnown RBP9.28□□□□□ -0.92
PDPN-201ENST00000294489 PCID2Q5JVF3 399 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 STXBP5Q5T5C0 1151 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 ATG16L1Q676U5 607 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 KYAT3Q6YP21 454 aaKnown RBP9.28□□□□□ -0.92
PDPN-201ENST00000294489 KCNMB4Q86W47 210 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 ZNF398Q8TD17 642 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 THOC1Q96FV9 657 aaKnown RBP9.28□□□□□ -0.92
PDPN-201ENST00000294489 HMCESQ96FZ2 354 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 TRIM55Q9BYV6 548 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 NACA2Q9H009 215 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 SP110Q9HB58 689 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 ATP13A1Q9HD20 1204 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 C20orf96Q9NUD7 363 aaPredicted RBP9.28□□□□□ -0.92
PDPN-201ENST00000294489 NSMCE4AQ9NXX6 385 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 IL1RAPL1Q9NZN1 696 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 SLC17A6Q9P2U8 582 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 DCDC2Q9UHG0 476 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 GGT7Q9UJ14 662 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 SLC12A4Q9UP95 1085 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 PSAT1Q9Y617 370 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 NOTCH4Q99466 2003 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 LCHNA4D1U4 455 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 C2orf71A6NGG8 1288 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 ZBBXA8MT70 800 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 TPP1O14773 563 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 UBOX5O94941 541 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 BGNP21810 368 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 TYK2P29597 1187 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 SLC11A2P49281 568 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 HARS2P49590 506 aaKnown RBP9.28□□□□□ -0.92
PDPN-201ENST00000294489 EPHA5P54756 1037 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 CDH4P55283 916 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 CCDC15Q0P6D6 951 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 MPP3Q13368 585 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 HSP90AA5PQ58FG0 334 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 MARC1Q5VT66 337 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 ALG1LQ6GMV1 187 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 CCDC149Q6ZUS6 474 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 STRA8Q7Z7C7 330 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 NUDCD3Q8IVD9 361 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 MRPL43Q8N983 215 aaKnown RBP9.28□□□□□ -0.92
PDPN-201ENST00000294489 PTPRN2Q92932 1015 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 RMDN2Q96LZ7 410 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 PRICKLE1Q96MT3 831 aaPredicted RBP9.28□□□□□ -0.92
PDPN-201ENST00000294489 ZNF599Q96NL3 588 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 FICDQ9BVA6 458 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 KIFC1Q9BW19 673 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 SLC4A7Q9Y6M7 1214 aa9.28□□□□□ -0.92
PDPN-201ENST00000294489 F5H5T6 163 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 RAMP2O60895 175 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 CXCL14O95715 111 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms