RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 LYNP07948 512 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 SCNN1GP51170 649 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 OLIG2Q13516 323 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 GRTP1Q5TC63 336 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 POC5Q8NA72 575 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 HPS1Q92902 700 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 MFSD3Q96ES6 412 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 KCTD15Q96SI1 283 aaPredicted RBP12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 CPNE1Q99829 537 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 STRA6Q9BX79 667 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 TRNAU1APQ9NX07 287 aaKnown RBP12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 SPDYE5A6NIY4 337 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 NFKBIEO00221 500 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 F9P00740 461 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 NPR3P17342 541 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 CCR1P32246 355 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 TUBP50607 506 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 TWF1Q12792 350 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 DLG2Q15700 870 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 RHBDF2Q6PJF5 856 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 PSTKQ8IV42 348 aaKnown RBP12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 GALNT15Q8N3T1 639 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 BHLHE22Q8NFJ8 381 aaPredicted RBP12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 DNAJC1Q96KC8 554 aaKnown RBP12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 ZNF512Q96ME7 567 aaPredicted RBP12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 NCKIPSDQ9NZQ3 722 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 MYH4Q9Y623 1939 aa12.71□□□□□ -0.37
SLC6A1-201ENST00000287766 PIPSLA2A3N6 862 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 TYW5A2RUC4 315 aaKnown RBP12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 SCAMP3O14828 347 aaKnown RBP12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 RAD51BO15315 384 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 HNRNPLP14866 589 aaKnown RBP eCLIP12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF157P51786 506 aaPredicted RBP12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 ILDR2Q71H61 639 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 DHFR2Q86XF0 187 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF398Q8TD17 642 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 MAGEC3Q8TD91 643 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 TXLNGYQ9BZA5 131 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 EPS8L2Q9H6S3 715 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 CDHR5Q9HBB8 845 aa12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 RSL24D1Q9UHA3 163 aaKnown RBP12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 AAR2Q9Y312 384 aaKnown RBP12.71□□□□□ -0.38
SLC6A1-201ENST00000287766 A0A1B0GW55 424 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 RHOBTB1O94844 696 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DUX4L2P0CJ85 424 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DUX4L3P0CJ86 424 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DUX4L4P0CJ87 422 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DUX4L5P0CJ88 424 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DUX4L6P0CJ89 424 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DUX4L7P0CJ90 424 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 CHRM3P20309 590 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 RAD23AP54725 363 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 SDHAF4Q5VUM1 108 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 RNF145Q96MT1 663 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 ABHD16BQ9H3Z7 469 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 LATS2Q9NRM7 1088 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DUX4Q9UBX2 424 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 EFR3BQ9Y2G0 817 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 KLHL20Q9Y2M5 609 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 HBS1LQ9Y450 684 aaKnown RBP12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 CAPN8A6NHC0 703 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 PIRTP0C851 137 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 JAK1P23458 1154 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 SERPINH1P50454 418 aaKnown RBP12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 MAXP61244 160 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 CSTF3Q12996 717 aaKnown RBP12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 MFSD10Q14728 455 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 AGAP9Q5VTM2 703 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 TDRPQ86YL5 185 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 HPS6Q86YV9 775 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 TRPC7Q9HCX4 862 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 CHRAC1Q9NRG0 131 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 TUBA8Q9NY65 449 aaPredicted RBP12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DKK3Q9UBP4 350 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 TDRKHQ9Y2W6 561 aaKnown RBP12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 AP4B1Q9Y6B7 739 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 LIN7AO14910 233 aaPredicted RBP12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 SNPHO15079 494 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 ODC1P11926 461 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 MATKP42679 507 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 GEMP55040 296 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 ACSBG2Q5FVE4 666 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 RALGPS1Q5JS13 557 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 ZFP1Q6P2D0 407 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DRICH1Q6PGQ1 229 aaPredicted RBP12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 AMIGO2Q86SJ2 522 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 ATG16L2Q8NAA4 619 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 PSMA8Q8TAA3 256 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 DCAKDQ8WVC6 231 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 TSPAN17Q96FV3 270 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 C1orf50Q9BV19 199 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 SPON1Q9HCB6 807 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 BTBD3Q9Y2F9 522 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 PPP2R3BQ9Y5P8 575 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 USP54Q70EL1 1684 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 EVPLLA8MZ36 301 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms