RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 CRHR1P34998 444 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 CDH4P55283 916 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 TWF1Q12792 350 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 SPDYAQ5MJ70 313 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 RANBP10Q6VN20 620 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 FAM47EQ6ZV65 393 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 ITIH5Q86UX2 942 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 ZNF75CPQ92670 426 aaPredicted RBP15.54■□□□□ 0.08
SF3B4-201ENST00000271628 MFSD3Q96ES6 412 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 IMP4Q96G21 291 aaKnown RBP15.54■□□□□ 0.08
SF3B4-201ENST00000271628 LRRC37BQ96QE4 947 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 RAB3IPQ96QF0 476 aaPredicted RBP15.54■□□□□ 0.08
SF3B4-201ENST00000271628 MAGEH1Q9H213 219 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 IL23AQ9NPF7 189 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 PLLPQ9Y342 182 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 PMPCBO75439 489 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 ITGA2BP08514 1039 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 ACRP10323 421 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 SPRP35270 261 aaPredicted RBP15.53■□□□□ 0.08
SF3B4-201ENST00000271628 ITKQ08881 620 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 SLC10A7Q0GE19 358 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 PLD1Q13393 1074 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 PABPC1LQ4VXU2 614 aaKnown RBP15.53■□□□□ 0.08
SF3B4-201ENST00000271628 PDPK2PQ6A1A2 396 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 DNAJB7Q7Z6W7 309 aaPredicted RBP15.53■□□□□ 0.08
SF3B4-201ENST00000271628 KCNMB4Q86W47 210 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 NDUFAF2Q8N183 169 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 PPHLN1Q8NEY8 458 aaKnown RBP15.53■□□□□ 0.08
SF3B4-201ENST00000271628 MRGPRX2Q96LB1 330 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 ZNF599Q96NL3 588 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 FAM111AQ96PZ2 611 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 DDX50Q9BQ39 737 aaKnown RBP15.53■□□□□ 0.08
SF3B4-201ENST00000271628 FICDQ9BVA6 458 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 TMEM106CQ9BVX2 250 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 SLC13A1Q9BZW2 595 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 ARNT2Q9HBZ2 717 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 NT5MQ9NPB1 228 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 MKI67P46013 3256 aaKnown RBP15.53■□□□□ 0.08
SF3B4-201ENST00000271628 CLDN11O75508 207 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 STC2O76061 302 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 PDE1BQ01064 536 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 STXBP5Q5T5C0 1151 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 TEDDM1Q5T9Z0 273 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 DENND5AQ6IQ26 1287 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 PKN3Q6P5Z2 889 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 OTOP2Q7RTS6 562 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 DENND1CQ8IV53 801 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 MANSC1Q9H8J5 431 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 MRM3Q9HC36 420 aaKnown RBP15.53■□□□□ 0.08
SF3B4-201ENST00000271628 C20orf96Q9NUD7 363 aaPredicted RBP15.53■□□□□ 0.08
SF3B4-201ENST00000271628 INSL5Q9Y5Q6 135 aa15.53■□□□□ 0.08
SF3B4-201ENST00000271628 PRAMEF11O60813 436 aa15.52■□□□□ 0.08
SF3B4-201ENST00000271628 SLC6A4P31645 630 aa15.52■□□□□ 0.08
SF3B4-201ENST00000271628 LBRQ14739 615 aaKnown RBP15.52■□□□□ 0.08
SF3B4-201ENST00000271628 ADGRF1Q5T601 910 aa15.52■□□□□ 0.08
SF3B4-201ENST00000271628 CIR1Q86X95 450 aaPredicted RBP15.52■□□□□ 0.08
SF3B4-201ENST00000271628 TRIM42Q8IWZ5 723 aa15.52■□□□□ 0.08
SF3B4-201ENST00000271628 BBS5Q8N3I7 341 aa15.52■□□□□ 0.08
SF3B4-201ENST00000271628 KLF16Q9BXK1 252 aaPredicted RBP15.52■□□□□ 0.08
SF3B4-201ENST00000271628 PRKD2Q9BZL6 878 aa15.52■□□□□ 0.08
SF3B4-201ENST00000271628 DCDC2Q9UHG0 476 aa15.52■□□□□ 0.08
SF3B4-201ENST00000271628 ASB3Q9Y575 518 aa15.52■□□□□ 0.08
SF3B4-201ENST00000271628 ZFP37Q9Y6Q3 630 aaPredicted RBP15.52■□□□□ 0.08
SF3B4-201ENST00000271628 TEX28O15482 410 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 LILRB3O75022 631 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 FGF18O76093 207 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 NEFHP12036 1026 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 PAMP19021 973 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 CORO1AP31146 461 aaKnown RBP15.52■□□□□ 0.07
SF3B4-201ENST00000271628 RASSF2P50749 326 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 CSE1LP55060 971 aaKnown RBP15.52■□□□□ 0.07
SF3B4-201ENST00000271628 WNT3AP56704 352 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 HSP90AA5PQ58FG0 334 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 TMCO4Q5TGY1 634 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 RFWD3Q6PCD5 774 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 CDHR3Q6ZTQ4 885 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 STRA8Q7Z7C7 330 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 HERC6Q8IVU3 1022 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 CFAP52Q8N1V2 620 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 KIF2BQ8N4N8 673 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 FIBCD1Q8N539 461 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 ZNF398Q8TD17 642 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 AGAP11Q8TF27 550 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 KLHL5Q96PQ7 755 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 RBBP8Q99708 897 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 POLR1EQ9GZS1 481 aaKnown RBP15.52■□□□□ 0.07
SF3B4-201ENST00000271628 RNF38Q9H0F5 515 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 CXorf56Q9H5V9 222 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 PCMTD2Q9NV79 361 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 PSAT1Q9Y617 370 aa15.52■□□□□ 0.07
SF3B4-201ENST00000271628 WDR91A4D1P6 747 aa15.51■□□□□ 0.07
SF3B4-201ENST00000271628 TIMM44O43615 452 aa15.51■□□□□ 0.07
SF3B4-201ENST00000271628 LATS1O95835 1130 aa15.51■□□□□ 0.07
SF3B4-201ENST00000271628 ALDOAP04075 364 aaKnown RBP15.51■□□□□ 0.07
SF3B4-201ENST00000271628 CTSAP10619 480 aa15.51■□□□□ 0.07
SF3B4-201ENST00000271628 NMBRP28336 390 aa15.51■□□□□ 0.07
SF3B4-201ENST00000271628 GNA12Q03113 381 aa15.51■□□□□ 0.07
SF3B4-201ENST00000271628 POU6F1Q14863 301 aa15.51■□□□□ 0.07
SF3B4-201ENST00000271628 KDELC1Q6UW63 502 aa15.51■□□□□ 0.07
SF3B4-201ENST00000271628 KYAT3Q6YP21 454 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms