RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TMCO4Q5TGY1 634 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 MARC1Q5VT66 337 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 CES5AQ6NT32 575 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 Q6ZNB5 142 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 MPP5Q8N3R9 675 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 C12orf76Q8N812 135 aaPredicted RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 MYEOVQ96EZ4 313 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 PRICKLE1Q96MT3 831 aaPredicted RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 PHF7Q9BWX1 381 aaPredicted RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 SFXN1Q9H9B4 322 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 MAN1C1Q9NR34 630 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 SAMD15Q9P1V8 674 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 TBK1Q9UHD2 729 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 CDH22Q9UJ99 828 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 TBC1D30Q9Y2I9 924 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 IKBKGQ9Y6K9 419 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 ZFP37Q9Y6Q3 630 aaPredicted RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 MYO18AQ92614 2054 aaKnown RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 F5H423 210 aaPredicted RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 PRPF4O43172 522 aaKnown RBP eCLIP15.61■□□□□ 0.09
COPS3-201ENST00000268717 GREM1O60565 184 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 POLBP06746 335 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 INHBAP08476 426 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 POU2F2P09086 479 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 DDX6P26196 483 aaKnown RBP eCLIP15.61■□□□□ 0.09
COPS3-201ENST00000268717 MGAT1P26572 445 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 LSP1P33241 339 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 SESN2P58004 480 aaPredicted RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 RFTN1Q14699 578 aaPredicted RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 GAREM2Q75VX8 874 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 OTOP3Q7RTS5 596 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 LEMD2Q8NC56 503 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 OR52K1Q8NGK4 314 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 USP33Q8TEY7 942 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 MZB1Q8WU39 189 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 PTCD2Q8WV60 388 aaKnown RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 CCDC134Q9H6E4 229 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 PDFQ9HBH1 243 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 ASAH2Q9NR71 780 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 GKN1Q9NS71 199 aa15.61■□□□□ 0.09
COPS3-201ENST00000268717 SMG5Q9UPR3 1016 aaKnown RBP15.61■□□□□ 0.09
COPS3-201ENST00000268717 FAM237BA0A1B0GVD1 139 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 USP1O94782 785 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 BRAFP15056 766 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 HDCP19113 662 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 ADRA1AP35348 466 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 GUCY1A3Q02108 690 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 GNA12Q03113 381 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 CRYMQ14894 314 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 EFTUD2Q15029 972 aaKnown RBP eCLIP15.6■□□□□ 0.092e-6■■■■■ 32.8
COPS3-201ENST00000268717 SLC14A2Q15849 920 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 PPM1LQ5SGD2 360 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 LGSNQ5TDP6 509 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 ALG1LQ6GMV1 187 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 CASC4Q6P4E1 433 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 RFWD3Q6PCD5 774 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 TMEM135Q86UB9 458 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 CIR1Q86X95 450 aaPredicted RBP15.6■□□□□ 0.09
COPS3-201ENST00000268717 SRRM1Q8IYB3 904 aaKnown RBP15.6■□□□□ 0.09
COPS3-201ENST00000268717 DNAAF3Q8N9W5 541 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 CDKL2Q92772 493 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 TADA1Q96BN2 335 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 ALKBH8Q96BT7 664 aaKnown RBP15.6■□□□□ 0.09
COPS3-201ENST00000268717 IMP4Q96G21 291 aaKnown RBP15.6■□□□□ 0.09
COPS3-201ENST00000268717 NECTIN4Q96NY8 510 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 TBL1YQ9BQ87 522 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 SELENOSQ9BQE4 189 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 TRPC7Q9HCX4 862 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 SYBUQ9NX95 663 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 DPP7Q9UHL4 492 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 LSM7Q9UK45 103 aaKnown RBP15.6■□□□□ 0.09
COPS3-201ENST00000268717 DOCK6Q96HP0 2047 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 OBSL1O75147 1896 aa15.6■□□□□ 0.09
COPS3-201ENST00000268717 MYO10Q9HD67 2058 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.59■□□□□ 0.09
COPS3-201ENST00000268717 TRAV19A0A0A6YYK7 116 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 J3KR12 359 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 HNRNPA1P09651 372 aaKnown RBP eCLIP15.59■□□□□ 0.09
COPS3-201ENST00000268717 CHN1P15882 459 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 KRT15P19012 456 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 CNTFP26441 200 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 SERPINB9P50453 376 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 ZNF177Q13360 481 aaPredicted RBP15.59■□□□□ 0.09
COPS3-201ENST00000268717 SPARCL1Q14515 664 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 TXNDC8Q6A555 127 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 ELMSAN1Q6PJG2 1045 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 TMC5Q6UXY8 1006 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 LEKR1Q6ZMV7 388 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 HTR3DQ70Z44 454 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 MARK2Q7KZI7 788 aaKnown RBP15.59■□□□□ 0.09
COPS3-201ENST00000268717 BBS5Q8N3I7 341 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 HJURPQ8NCD3 748 aaPredicted RBP15.59■□□□□ 0.09
COPS3-201ENST00000268717 MTBPQ96DY7 904 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 RIPOR3Q96MK2 946 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 SMC6Q96SB8 1091 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 TRABDQ9H4I3 376 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 ARNT2Q9HBZ2 717 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 INTS9Q9NV88 658 aaKnown RBP15.59■□□□□ 0.09
COPS3-201ENST00000268717 ZMYM5Q9UJ78 669 aa15.59■□□□□ 0.09
COPS3-201ENST00000268717 CPQQ9Y646 472 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms