RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 HSPH1Q92598 858 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 FUBP3Q96I24 572 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRPF6-201ENST00000266079 TBCBQ99426 244 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 SLC28A3Q9HAS3 691 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 TIMMDC1Q9NPL8 285 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 A0A1W2PQH9 124 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 PRR5-ARHGAP8B1AHC4 643 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 TNFRSF10BO14763 440 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 IFNB1P01574 187 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 LTFP02788 710 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 FYNP06241 537 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 SULT1E1P49888 294 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 ARHGAP8P85298 464 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 TWF1Q12792 350 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 TAF10Q12962 218 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 GPM6BQ13491 265 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 FBXL19Q6PCT2 694 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 PALM2Q8IXS6 379 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 NUP93Q8N1F7 819 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 FBXO36Q8NEA4 188 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 SLC26A7Q8TE54 656 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 FBXO32Q969P5 355 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 SLITRK1Q96PX8 696 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 WDR83Q9BRX9 315 aaKnown RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 DDX18Q9NVP1 670 aaKnown RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 OSER1Q9NX31 292 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 SFMBT1Q9UHJ3 866 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 ARHGAP42A6NI28 874 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 M0QYT0 321 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 MSI1O43347 362 aaKnown RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 CCNT2O60583 730 aaKnown RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 ATP5BP06576 529 aaKnown RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 MIPP30301 263 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 ZNF143P52747 638 aaPredicted RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 ALDH18A1P54886 795 aaKnown RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 FOLH1Q04609 750 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 CDK18Q07002 472 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 RAB41Q5JT25 222 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 MFSD7Q6UXD7 560 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 NKD2Q969F2 451 aaPredicted RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 ABTB1Q969K4 478 aaPredicted RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 CNGB3Q9NQW8 809 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■■■■□ 24.2
PRPF6-201ENST00000266079 AFF4Q9UHB7 1163 aaKnown RBP12.85□□□□□ -0.35
PRPF6-201ENST00000266079 YIPF1Q9Y548 306 aa12.85□□□□□ -0.35
PRPF6-201ENST00000266079 PLXNA4Q9HCM2 1894 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 SGK1O00141 431 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 PEX1O43933 1283 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 CLPTM1O96005 669 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 ITGAVP06756 1048 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 BST1Q10588 318 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 PLD1Q13393 1074 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 CCNIQ14094 377 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 TRIP10Q15642 601 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 HSP90AA5PQ58FG0 334 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 ANKRD22Q5VYY1 191 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 ZNF554Q86TJ5 538 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 PPIL6Q8IXY8 311 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 SLC22A17Q8WUG5 538 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 RBM38Q9H0Z9 239 aaKnown RBP12.84□□□□□ -0.35
PRPF6-201ENST00000266079 POPDC2Q9HBU9 364 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 NLRC5Q86WI3 1866 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 VCANP13611 3396 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.84□□□□□ -0.35
PRPF6-201ENST00000266079 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.84□□□□□ -0.35
PRPF6-201ENST00000266079 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 MEI4A8MW99 385 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 E7ESA3 106 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 SCAMP3O14828 347 aaKnown RBP12.84□□□□□ -0.35
PRPF6-201ENST00000266079 RFPL2O75678 378 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 HNRNPCP07910 306 aaKnown RBP eCLIP12.84□□□□□ -0.359e-7■□□□□ 8.9
PRPF6-201ENST00000266079 SERPINA6P08185 405 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 EMP3P54852 163 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 AQP5P55064 265 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 IRX4P78413 519 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 DCTN2Q13561 401 aaKnown RBP12.84□□□□□ -0.35
PRPF6-201ENST00000266079 NADK2Q4G0N4 442 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 FAM182AQ5T1J6 154 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 BTBD8Q5XKL5 378 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 DUS1LQ6P1R4 473 aaKnown RBP12.84□□□□□ -0.35
PRPF6-201ENST00000266079 BHLHA9Q7RTU4 235 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 MIB1Q86YT6 1006 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 MAP7D3Q8IWC1 876 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 ALDH16A1Q8IZ83 802 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 MARVELD2Q8N4S9 558 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 ICA1LQ8NDH6 482 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 GAB3Q8WWW8 586 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 JADE3Q92613 823 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 ZNF512Q96ME7 567 aaPredicted RBP12.84□□□□□ -0.35
PRPF6-201ENST00000266079 PEBP4Q96S96 227 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 CNPY3Q9BT09 278 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 TMEM121Q9BTD3 319 aa12.84□□□□□ -0.35
PRPF6-201ENST00000266079 C11orf84Q9BUA3 381 aaPredicted RBP12.84□□□□□ -0.35
PRPF6-201ENST00000266079 CASQ2O14958 399 aaPredicted RBP12.83□□□□□ -0.35
PRPF6-201ENST00000266079 HMBSP08397 361 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 TSHRP16473 764 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 YWHAQP27348 245 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms