RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 DDX39BQ13838 428 aaKnown RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 GRB14Q14449 540 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 MAPKAPK3Q16644 382 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 USP43Q70EL4 1123 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 THAP5Q7Z6K1 395 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 SNX32Q86XE0 403 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 WDR48Q8TAF3 677 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 NACC2Q96BF6 587 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 RTKNQ9BST9 563 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 FAM126AQ9BYI3 521 aaPredicted RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 MAGED1Q9Y5V3 778 aaPredicted RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 SH3D21A4FU49 640 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 SUV39H1O43463 412 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 SEC22BO75396 215 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 TADA2AO75478 443 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 USP17L8P0C7I0 530 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 GSTT2P0CG29 244 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 CYP11B1P15538 503 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 TCF7P36402 384 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 ASMTP46597 345 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 CLCN5P51795 746 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 SLCO6A1Q86UG4 719 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 ZNF548Q8NEK5 533 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 C11orf24Q96F05 449 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 EDC3Q96F86 508 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 CHP1Q99653 195 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 SCUBE2Q9NQ36 999 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 ALG5Q9Y673 324 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 USP42Q9H9J4 1324 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 DHX15O43143 795 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 ZBTB14O43829 449 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 GMFGO60234 142 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 NMT2O60551 498 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 PARNO95453 639 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 GCNT1Q02742 428 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 RASGEF1BQ0VAM2 473 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 ZNF268Q14587 947 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 UBE2SQ16763 222 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 RAD9BQ6WBX8 426 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 BRINP3Q76B58 766 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 CPNE9Q8IYJ1 553 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 PACRGLQ8N7B6 248 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 ZNF614Q8N883 585 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 IPCEF1Q8WWN9 437 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 HDAC2Q92769 488 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 NELL1Q92832 810 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 REEP2Q9BRK0 252 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 DDX43Q9NXZ2 648 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 ITGA11Q9UKX5 1188 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 TDRKHQ9Y2W6 561 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 TELO2Q9Y4R8 837 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 ADGBQ8N7X0 1667 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 APOC4-APOC2K7ER74 178 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 SNX3O60493 162 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 APOC2P02655 101 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 FTH1P02794 183 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 ATF4P18848 351 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 OVGP1Q12889 678 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 CBX3Q13185 183 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 PON3Q15166 354 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 SBK1Q52WX2 424 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 FBXO31Q5XUX0 539 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 CRTC3Q6UUV7 619 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 MFSD7Q6UXD7 560 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 KCNMB4Q86W47 210 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 GATAD2AQ86YP4 633 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 CHERPQ8IWX8 916 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 SENP2Q9HC62 589 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 EXD2Q9NVH0 621 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 PCDHGB7Q9Y5F8 929 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 ARHGEF40Q8TER5 1519 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 KANTRA0A1W2PQU2 76 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 ZSCAN5CA6NGD5 496 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 CLCA1A8K7I4 914 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 PLEKHA8P1O95397 391 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 HOXA13P31271 388 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 RRP1BQ14684 758 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 TAF5Q15542 800 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 PSMD5Q16401 504 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 SWSAP1Q6NVH7 229 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 FAM131AQ6UXB0 335 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 PACS2Q86VP3 889 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 REXO1L1PQ8IX06 675 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 CMTR2Q8IYT2 770 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 GALNT15Q8N3T1 639 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 LBHD1Q9BQE6 289 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 ACE2Q9BYF1 805 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 SLC22A4Q9H015 551 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 FAM124BQ9H5Z6 455 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 MARCH7Q9H992 704 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 MID1IP1Q9NPA3 183 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 THUMPD1Q9NXG2 353 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 PNMA8BQ9ULN7 279 aaPredicted RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 RAP2CQ9Y3L5 183 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 A0A096LPK6 155 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 CASKO14936 926 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 CPSF4O95639 269 aaKnown RBP5.51□□□□□ -1.53
XRN1-201ENST00000264951 PAEPP09466 180 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 PNLIPRP1P54315 467 aa5.51□□□□□ -1.53
XRN1-201ENST00000264951 PLEKHN1Q494U1 663 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms