RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 WASH3PC4AMC7 463 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 WASH2PQ6VEQ5 465 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 P4HA3Q7Z4N8 544 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 TTC7BQ86TV6 843 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
USP13-201ENST00000263966 PLA2G12BQ9BX93 195 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.69■□□□□ 0.26
USP13-201ENST00000263966 CDH9Q9ULB4 789 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 ACADSP16219 412 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 NUMBP49757 651 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 CBX3Q13185 183 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 PDPK2PQ6A1A2 396 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 ATG14Q6ZNE5 492 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.69■□□□□ 0.26
USP13-201ENST00000263966 TRIM64BA6NI03 449 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 QKIQ96PU8 341 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■■■ 31.3
USP13-201ENST00000263966 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.69■□□□□ 0.26
USP13-201ENST00000263966 TBC1D30Q9Y2I9 924 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 NFASCO94856 1347 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 ALDH3A2P51648 485 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 HJURPQ8NCD3 748 aaPredicted RBP16.69■□□□□ 0.26
USP13-201ENST00000263966 TEX47Q8TBZ9 253 aa16.69■□□□□ 0.26
USP13-201ENST00000263966 MTFMTQ96DP5 389 aaKnown RBP16.69■□□□□ 0.26
USP13-201ENST00000263966 HBS1LQ9Y450 684 aaKnown RBP16.69■□□□□ 0.26
USP13-201ENST00000263966 IRGMA1A4Y4 181 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 ASNA1O43681 348 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 VARSP26640 1264 aaKnown RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 CASP6P55212 293 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 PRR23BQ6ZRT6 265 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 PHF10Q8WUB8 498 aaKnown RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 MLPHQ9BV36 600 aaPredicted RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 ICE1Q9Y2F5 2266 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 RAP1GAPP47736 663 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 FIP1L1Q6UN15 594 aaKnown RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 ZBTB49Q6ZSB9 765 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 ARHGEF19Q8IW93 802 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 MYLPFQ96A32 169 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 TEKT5Q96M29 485 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 TRNT1Q96Q11 434 aaKnown RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 PLEKHF1Q96S99 279 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 ARID1BQ8NFD5 2236 aaPredicted RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 MOXD2PA6NHM9 499 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 KCNQ2O43526 872 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 BCL10O95999 233 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 NPTX2P47972 431 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 ACVR2BQ13705 512 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 AKIRIN2Q53H80 203 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 SELENOMQ8WWX9 145 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 PER1O15534 1290 aaPredicted RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 UBXN7O94888 489 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 TOP3BO95985 862 aaKnown RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 TAS2R50P59544 299 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 PTPN11Q06124 597 aaPredicted RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 MGAT5Q09328 741 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 TMC5Q6UXY8 1006 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 MPP5Q8N3R9 675 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 SHDQ96IW2 340 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 FAM129BQ96TA1 746 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 ERVK-9P63128 1117 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 PFKPQ01813 784 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 TTC29Q8NA56 475 aaPredicted RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 FDXACB1Q9BRP7 624 aaPredicted RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 TMEM79Q9BSE2 394 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 ISCA1Q9BUE6 129 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 GMIPQ9P107 970 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 ERVK-11Q9UQG0 969 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 SSNA1O43805 119 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 PLEKP08567 350 aaPredicted RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 PUDPQ08623 228 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 TRAF3Q13114 568 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 FRG1Q14331 258 aaKnown RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 PPP1R15BQ5SWA1 713 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 CHSY3Q70JA7 882 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 JAZF1Q86VZ6 243 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 FMR1NBQ8N0W7 255 aaPredicted RBP16.68■□□□□ 0.26
USP13-201ENST00000263966 ADAM2Q99965 735 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 PEX14O75381 377 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 IL12BP29460 328 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 TBCELQ5QJ74 424 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 KYQ8NBH2 561 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 VAT1Q99536 393 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 TBC1D14Q9P2M4 693 aa16.68■□□□□ 0.26
USP13-201ENST00000263966 LIN7AO14910 233 aaPredicted RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 EIF3HO15372 352 aaKnown RBP eCLIP16.67■□□□□ 0.26
USP13-201ENST00000263966 IFNA6P05013 189 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 TOB2Q14106 344 aaPredicted RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 PDP2Q9P2J9 529 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 CALB2P22676 271 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 POLD2P49005 469 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 TRIM40Q6P9F5 258 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 GTF3C4Q9UKN8 822 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 OGNP20774 298 aaKnown RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 CDH5P33151 784 aaPredicted RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 ERVK-24P63145 666 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 RASGEF1BQ0VAM2 473 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 SMARCB1Q12824 385 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 TRAP1Q12931 704 aaKnown RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 FASTKQ14296 549 aaKnown RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 METTL21CQ5VZV1 264 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms