RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 EDEM1Q92611 657 aa19.63■□□□□ 0.73
SCARB1-201ENST00000261693 EZH1Q92800 747 aaPredicted RBP19.63■□□□□ 0.73
SCARB1-201ENST00000261693 RHOJQ9H4E5 214 aa19.63■□□□□ 0.73
SCARB1-201ENST00000261693 EFCAB1Q9HAE3 211 aa19.63■□□□□ 0.73
SCARB1-201ENST00000261693 RAB26Q9ULW5 256 aa19.63■□□□□ 0.73
SCARB1-201ENST00000261693 USP17L7P0C7H9 530 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 SLC12A1Q13621 1099 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 MAP7Q14244 749 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 KIAA0319Q5VV43 1072 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 WSCD1Q658N2 575 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 ZFP1Q6P2D0 407 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 KLHDC10Q6PID8 442 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 GK5Q6ZS86 529 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 GPRIN1Q7Z2K8 1008 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 MFSD6LQ8IWD5 586 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 PCDH20Q8N6Y1 951 aaKnown RBP19.62■□□□□ 0.73
SCARB1-201ENST00000261693 STYXQ8WUJ0 223 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 HIC2Q96JB3 615 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 SEMA6AQ9H2E6 1030 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 VAPBO95292 243 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 CCNA1P78396 465 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 SEMA3BQ13214 749 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 FRG1Q14331 258 aaKnown RBP19.62■□□□□ 0.73
SCARB1-201ENST00000261693 SH2D4BQ5SQS7 431 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 FAM219BQ5XKK7 198 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 RDH11Q8TC12 318 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 ANKRD6Q9Y2G4 727 aa19.62■□□□□ 0.73
SCARB1-201ENST00000261693 TCAF2A6NFQ2 919 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 ERI2A8K979 691 aaKnown RBP19.61■□□□□ 0.73
SCARB1-201ENST00000261693 RNASEH2AO75792 299 aaKnown RBP19.61■□□□□ 0.73
SCARB1-201ENST00000261693 PGK1P00558 417 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 HNRNPLP14866 589 aaKnown RBP eCLIP19.61■□□□□ 0.731e-7■■■■□ 21.9
SCARB1-201ENST00000261693 CDH17Q12864 832 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 NRF1Q16656 503 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 ITPRIPL1Q6GPH6 555 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 KDELC2Q7Z4H8 507 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 TICAM1Q8IUC6 712 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 TMEM40Q8WWA1 233 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 DDX18Q9NVP1 670 aaKnown RBP19.61■□□□□ 0.73
SCARB1-201ENST00000261693 VPS28Q9UK41 221 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 FBXW11Q9UKB1 542 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 ACOT9Q9Y305 439 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 LTBP3Q9NS15 1303 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 PDCD11Q14690 1871 aaKnown RBP19.61■□□□□ 0.73
SCARB1-201ENST00000261693 A0A1B0GTW7 788 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 NEMP2A6NFY4 417 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 KCNU1A8MYU2 1149 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 CXCL11O14625 94 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 BCAS2O75934 225 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-201ENST00000261693 MT-CYBP00156 380 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-201ENST00000261693 YBX3P16989 372 aaKnown RBP eCLIP19.61■□□□□ 0.731e-6■□□□□ 8
SCARB1-201ENST00000261693 CSRP3P50461 194 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 PTK2BQ14289 1009 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 SV2CQ496J9 727 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 TSTD2Q5T7W7 516 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 SETD3Q86TU7 594 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-201ENST00000261693 SNX31Q8N9S9 440 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 ADCY4Q8NFM4 1077 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 ATP6V1E2Q96A05 226 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 HDAC11Q96DB2 347 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 TEKT5Q96M29 485 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 PCDHAC1Q9H158 963 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 GTSE1Q9NYZ3 720 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 NDUFA13Q9P0J0 144 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 VTI1BQ9UEU0 232 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 NRCAMQ92823 1304 aa19.61■□□□□ 0.73
SCARB1-201ENST00000261693 TARM1B6A8C7 271 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 ACOT8O14734 319 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 NCAM2O15394 837 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 RGS2P41220 211 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 DGKDQ16760 1214 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 MYLK3Q32MK0 819 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 IL23RQ5VWK5 629 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 ZNF280DQ6N043 979 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 ARHGAP36Q6ZRI8 547 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 RPS27LQ71UM5 84 aaKnown RBP19.6■□□□□ 0.73
SCARB1-201ENST00000261693 KDM1BQ8NB78 822 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 ARRDC4Q8NCT1 418 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 ZFP28Q8NHY6 868 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 EPB41L1Q9H4G0 881 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.6■□□□□ 0.73
SCARB1-201ENST00000261693 OR12D3Q9UGF7 316 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 TRHDEQ9UKU6 1024 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 PRSS51A0A1B0GVH4 220 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 CSPG5O95196 566 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 TNFAIP8O95379 198 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 CNTD1Q8N815 330 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 DCPSQ96C86 337 aaKnown RBP19.6■□□□□ 0.73
SCARB1-201ENST00000261693 TMEM30AQ9NV96 361 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 BCAP29Q9UHQ4 241 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 TIMM13Q9Y5L4 95 aaPredicted RBP19.6■□□□□ 0.73
SCARB1-201ENST00000261693 CEP350Q5VT06 3117 aa19.6■□□□□ 0.73
SCARB1-201ENST00000261693 MMP3P08254 477 aa19.59■□□□□ 0.73
SCARB1-201ENST00000261693 FAM200BP0CF97 657 aa19.59■□□□□ 0.73
SCARB1-201ENST00000261693 SMPD1P17405 629 aa19.59■□□□□ 0.73
SCARB1-201ENST00000261693 HDCP19113 662 aa19.59■□□□□ 0.73
SCARB1-201ENST00000261693 PNPLA4P41247 253 aa19.59■□□□□ 0.73
SCARB1-201ENST00000261693 GALNT2Q10471 571 aa19.59■□□□□ 0.73
SCARB1-201ENST00000261693 NAPEPLDQ6IQ20 393 aa19.59■□□□□ 0.73
SCARB1-201ENST00000261693 ESRP1Q6NXG1 681 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms