RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CLEC6AQ6EIG7 209 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 DCLRE1AQ6PJP8 1040 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 SDCCAG8Q86SQ7 713 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-201ENST00000258607 IFNEQ86WN2 208 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 DDI1Q8WTU0 396 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 PAWRQ96IZ0 340 aaKnown RBP9.23□□□□□ -0.93
CKAP2-201ENST00000258607 MTG2Q9H4K7 406 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 PCDHA11Q9Y5I1 949 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ZFP37Q9Y6Q3 630 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-201ENST00000258607 PRR23AA6NEV1 266 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 BHMG1C9JSJ3 638 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 DCLK1O15075 740 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 SUPT7LO94864 414 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 SIX3O95343 332 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 GUCA1CO95843 209 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 JUNP05412 331 aaKnown RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 CPA3P15088 417 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 MX2P20592 715 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 CES1P23141 567 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 LRPAP1P30533 357 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 SLC1A6P48664 564 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 INHBEP58166 350 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 KPNB1Q14974 876 aaKnown RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 PARP6Q2NL67 630 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 ZRANB3Q5FWF4 1079 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 DRICH1Q6PGQ1 229 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 BZW1Q7L1Q6 419 aaKnown RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 ZDHHC17Q8IUH5 632 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 FBXO22Q8NEZ5 403 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 DNAJC1Q96KC8 554 aaKnown RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 LRRC40Q9H9A6 602 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 ATP13A1Q9HD20 1204 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 ABCC13Q9NSE7 274 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 NKX1-2Q9UD57 310 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 VPS28Q9UK41 221 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 SLC45A1Q9Y2W3 748 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 ARID1BQ8NFD5 2236 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 CFAP54Q96N23 3096 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 AHSGP02765 367 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 FMO4P31512 558 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 SMAD3P84022 425 aaKnown RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 ECT2LQ008S8 904 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 TREML1Q86YW5 311 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 DCP1BQ8IZD4 617 aaKnown RBP9.22□□□□□ -0.93
CKAP2-201ENST00000258607 TMEM86AQ8N2M4 240 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 CDC26Q8NHZ8 85 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 SLC22A17Q8WUG5 538 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 TEKT4Q8WW24 435 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 HDAC11Q96DB2 347 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 TBL1YQ9BQ87 522 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 DERAQ9Y315 318 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 PLLPQ9Y342 182 aa9.22□□□□□ -0.93
CKAP2-201ENST00000258607 HHLA1C9JL84 531 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 PPP6CO00743 305 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 KIF3CO14782 793 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 KRT36O76013 467 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 ALPIP09923 528 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 CCDC166P0CW27 439 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 GGT5P36269 586 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 PGM1P36871 562 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 TAS2R39P59534 338 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 PITRM1Q5JRX3 1037 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 SMYD5Q6GMV2 418 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 RINLQ6ZS11 566 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 CLNKQ7Z7G1 428 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 CEP97Q8IW35 865 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 GRIN3AQ8TCU5 1115 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 PYDC1Q8WXC3 89 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 STMN2Q93045 179 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.21□□□□□ -0.93
CKAP2-201ENST00000258607 RXFP1Q9HBX9 757 aa9.21□□□□□ -0.93
CKAP2-201ENST00000258607 MARCH4Q9P2E8 410 aaPredicted RBP9.21□□□□□ -0.93
CKAP2-201ENST00000258607 KCNU1A8MYU2 1149 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 STX16-NPEPL1H3BU86 382 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 TPST1O60507 370 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 GCATO75600 419 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 RFPL2O75678 378 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 PIGNO95427 931 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 ATP6V1G2O95670 118 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 SELPP16109 830 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 PGAM1P18669 254 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 SLC1A2P43004 574 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 RGRP47804 291 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 NR2C2P49116 596 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 DPYSQ14117 519 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 MS4A13Q5J8X5 152 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 GPR158Q5T848 1215 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 CEP128Q6ZU80 1094 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 DET1Q7L5Y6 550 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 PHTF2Q8N3S3 785 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 GIMAP7Q8NHV1 300 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 SLC26A7Q8TE54 656 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 CORO1BQ9BR76 489 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 GPAMQ9HCL2 828 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 LGALS13Q9UHV8 139 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 PCDHB9Q9Y5E1 797 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 FAM95CA0A1B0GW59 222 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 MTMR11A4FU01 709 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 C5orf60A6NFR6 353 aa9.21□□□□□ -0.94
CKAP2-201ENST00000258607 CLGNO14967 610 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms