RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 VPS51Q9UID3 782 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 ITGB4P16144 1822 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 A0A1B0GVM2 712 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 TCAF2A6NFQ2 919 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 PSMA4P25789 261 aaKnown RBP15.18■□□□□ 0.02
UBE4B-201ENST00000253251 SCTRP47872 440 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 DDX39BQ13838 428 aaKnown RBP15.18■□□□□ 0.02
UBE4B-201ENST00000253251 PIWIL4Q7Z3Z4 852 aaKnown RBP15.18■□□□□ 0.02
UBE4B-201ENST00000253251 TMPRSS6Q8IU80 811 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 SCUBE1Q8IWY4 988 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 HAPLN3Q96S86 360 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 MYCBPQ99417 103 aaPredicted RBP15.18■□□□□ 0.02
UBE4B-201ENST00000253251 MRPL57Q9BQC6 102 aaKnown RBP15.18■□□□□ 0.02
UBE4B-201ENST00000253251 SDCBP2Q9H190 292 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 MMADHCQ9H3L0 296 aaPredicted RBP15.18■□□□□ 0.02
UBE4B-201ENST00000253251 VRTNQ9H8Y1 702 aa15.18■□□□□ 0.02
UBE4B-201ENST00000253251 PIH1D1Q9NWS0 290 aaKnown RBP15.18■□□□□ 0.02
UBE4B-201ENST00000253251 C15orf38-AP3S2A0A0A6YYH1 394 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 FKBP9O95302 570 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 ACTN3Q08043 901 aaPredicted RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 INCA1Q0VD86 236 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 TIGD5Q53EQ6 642 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 MFSD5Q6N075 450 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 CNKSR3Q6P9H4 555 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 FKBP9P1Q75LS8 142 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 TRMT11Q7Z4G4 463 aaKnown RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 ARPINQ7Z6K5 226 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 CXorf40AQ8TE69 158 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 GBA3Q9H227 469 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 IGFLR1Q9H665 355 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 MINDY3Q9H8M7 445 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 EIF2B3Q9NR50 452 aaKnown RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 CCNT2O60583 730 aaKnown RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 FKBP6O75344 327 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 IFNA14P01570 189 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 PBLDP30039 288 aaPredicted RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 RAB10P61026 200 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 PATL1Q86TB9 770 aaKnown RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 IFNLR1Q8IU57 520 aaPredicted RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 IQCKQ8N0W5 287 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 KIF2BQ8N4N8 673 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 THUMPD3Q9BV44 507 aaKnown RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 SHCBP1LQ9BZQ2 653 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 IGKV6D-21A0A0A0MT36 114 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 KCNU1A8MYU2 1149 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 KCNA4P22459 653 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 SERPINB5P36952 375 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 INPP1P49441 399 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 SLC20A2Q08357 652 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 TRIP10Q15642 601 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 TRMT5Q32P41 509 aaKnown RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 TTMPQ5BVD1 217 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 TAC4Q86UU9 113 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 RFWD2Q8NHY2 731 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 PHF21BQ96EK2 531 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 OPTCQ9UBM4 332 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 FZD10Q9ULW2 581 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 NHSQ6T4R5 1651 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 FTH1P02794 183 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 PFKMP08237 780 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 COL6A2P12110 1019 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 CORO1AP31146 461 aaKnown RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 NFYCQ13952 458 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 DPYSL2Q16555 572 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 INSCQ1MX18 579 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 GALNTL6Q49A17 601 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 TXNDC11Q6PKC3 985 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 RTL3Q8N8U3 475 aaKnown RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 KYQ8NBH2 561 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 UBE2E3Q969T4 207 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 OXNAD1Q96HP4 312 aaPredicted RBP15.17■□□□□ 0.02
UBE4B-201ENST00000253251 RHOJQ9H4E5 214 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 ERVK-5Q9HDB9 667 aa15.17■□□□□ 0.02
UBE4B-201ENST00000253251 TCRBV9S1A1TA0A576 114 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 MFSD11O43934 449 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 DGKIO75912 1065 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 ITGA2BP08514 1039 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 ANXA5P08758 320 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 OR4Q2P0C623 313 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 PRIM2P49643 509 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 RPL14P50914 215 aaKnown RBP15.16■□□□□ 0.02
UBE4B-201ENST00000253251 PDK4Q16654 411 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 LLGL2Q6P1M3 1020 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 MILR1Q7Z6M3 343 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 ADAMTSL2Q86TH1 951 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 LEMD2Q8NC56 503 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 SERAC1Q96JX3 654 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 PCYT2Q99447 389 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 SLC25A51Q9H1U9 297 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 MID1IP1Q9NPA3 183 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 MPP6Q9NZW5 540 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 CFAP97Q9P2B7 532 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 SALL4Q9UJQ4 1053 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 R3HDM2Q9Y2K5 976 aaKnown RBP15.16■□□□□ 0.02
UBE4B-201ENST00000253251 MATN3O15232 486 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 AP2A1O95782 977 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 CPA2P48052 419 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 HCAR3P49019 387 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 NDUFV1P49821 464 aa15.16■□□□□ 0.02
UBE4B-201ENST00000253251 APLP1P51693 650 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms