RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 TCF12Q99081 682 aa16.1■□□□□ 0.17
SLC6A8-201ENST00000253122 GPATCH1Q9BRR8 931 aaKnown RBP16.1■□□□□ 0.17
SLC6A8-201ENST00000253122 SEPT3Q9UH03 358 aa16.1■□□□□ 0.17
SLC6A8-201ENST00000253122 MFHAS1Q9Y4C4 1052 aa16.1■□□□□ 0.17
SLC6A8-201ENST00000253122 SQORQ9Y6N5 450 aa16.1■□□□□ 0.17
SLC6A8-201ENST00000253122 NFASCO94856 1347 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 SMCHD1A6NHR9 2005 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 GCATO75600 419 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 GPD2P43304 727 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 OGFOD2Q6N063 350 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 TMEM192Q8IY95 271 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 DEFB106AQ8N104 65 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 C1orf127Q8N9H9 656 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 DTLQ9NZJ0 730 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 ZDHHC2Q9UIJ5 367 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 FZD1Q9UP38 647 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 A0A1B0GTW7 788 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 PTGES3LE9PB15 166 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 BAIAP3O94812 1187 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 DPYSQ14117 519 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 IKBKEQ14164 716 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 GRM3Q14832 879 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 CES4AQ5XG92 561 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 GADL1Q6ZQY3 521 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 CHST15Q7LFX5 561 aaPredicted RBP16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 SPPL2CQ8IUH8 684 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 NDRG1Q92597 394 aaKnown RBP16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 MCRS1Q96EZ8 462 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 SLC25A23Q9BV35 468 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 ZNF696Q9H7X3 374 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 CSADQ9Y600 493 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 CABYRO75952 493 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 DDNO94850 711 aaPredicted RBP16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 SMIM18P0DKX4 95 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 UGT1A6P19224 532 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 UGT1A1P22309 533 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 UGT1A4P22310 534 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 UGT1A3P35503 534 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 UGT1A5P35504 534 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 MAGEA10P43363 369 aaPredicted RBP16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 ZNF132P52740 706 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 GNA12Q03113 381 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 LY6KQ17RY6 165 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 ADCK1Q86TW2 530 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 SHCBP1Q8NEM2 672 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 RNF139Q8WU17 664 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 CANT1Q8WVQ1 401 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 RBBP8Q99708 897 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 CDT1Q9H211 546 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 ZFYVE28Q9HCC9 887 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 EBF1Q9UH73 591 aa16.09■□□□□ 0.17
SLC6A8-201ENST00000253122 NEMP2A6NFY4 417 aa16.08■□□□□ 0.17
SLC6A8-201ENST00000253122 MFSD11O43934 449 aa16.08■□□□□ 0.17
SLC6A8-201ENST00000253122 NAPEPLDQ6IQ20 393 aa16.08■□□□□ 0.17
SLC6A8-201ENST00000253122 GALNT18Q6P9A2 607 aa16.08■□□□□ 0.17
SLC6A8-201ENST00000253122 NAPRTQ6XQN6 538 aa16.08■□□□□ 0.17
SLC6A8-201ENST00000253122 CATSPER4Q7RTX7 472 aa16.08■□□□□ 0.17
SLC6A8-201ENST00000253122 SORT1Q99523 831 aa16.08■□□□□ 0.17
SLC6A8-201ENST00000253122 CDC14AQ9UNH5 594 aa16.08■□□□□ 0.17
SLC6A8-201ENST00000253122 FADS3Q9Y5Q0 445 aa16.08■□□□□ 0.17
SLC6A8-201ENST00000253122 ACKR2O00590 384 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 NFKBIAP25963 317 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 LIMK2P53671 638 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 RPL26P61254 145 aaKnown RBP16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 NAB1Q13506 487 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 GPR162Q16538 588 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 TMEM26Q6ZUK4 368 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 TTC39CQ8N584 583 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 ZNF280CQ8ND82 737 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 RIN3Q8TB24 985 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 GRIN3AQ8TCU5 1115 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 CCDC97Q96F63 343 aaPredicted RBP16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 VPS45Q9NRW7 570 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 HOXC10Q9NYD6 342 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 DSEQ9UL01 958 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 COPG1Q9Y678 874 aaKnown RBP16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 A0A087WZ62 844 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 DHRS12A0PJE2 317 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 CILPO75339 1184 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 TADA2AO75478 443 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 NSUN2Q08J23 767 aaKnown RBP eCLIP16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 CCDC81Q6ZN84 652 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 ARMCX2Q7L311 632 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 PSTKQ8IV42 348 aaKnown RBP16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 PPHLN1Q8NEY8 458 aaKnown RBP16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 DNAJB14Q8TBM8 379 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 NCLNQ969V3 563 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 NXNL1Q96CM4 212 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 RNF145Q96MT1 663 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 FDXACB1Q9BRP7 624 aaPredicted RBP16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 C9orf16Q9BUW7 83 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 PLEKHA5Q9HAU0 1116 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 TSR3Q9UJK0 312 aaKnown RBP16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 KIAA1257Q9ULG3 409 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 DGKBQ9Y6T7 804 aa16.08■□□□□ 0.16
SLC6A8-201ENST00000253122 BCAS2O75934 225 aaPredicted RBP16.07■□□□□ 0.16
SLC6A8-201ENST00000253122 CCNA2P20248 432 aa16.07■□□□□ 0.16
SLC6A8-201ENST00000253122 LSM3P62310 102 aaKnown RBP16.07■□□□□ 0.16
SLC6A8-201ENST00000253122 NFYCQ13952 458 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms