RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SOX13Q9UN79 622 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 MYLKQ15746 1914 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 CCDC195A0A1B0GUA6 201 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 CSPG5O95196 566 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 MT-CYBP00156 380 aaPredicted RBP14.41□□□□□ -0.1
SDF2-201ENST00000247020 CYBBP04839 570 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 INHBAP08476 426 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 GJA1P17302 382 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 CNTFP26441 200 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 USP4Q13107 963 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 SLC12A1Q13621 1099 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 INO80DQ53TQ3 878 aaPredicted RBP14.41□□□□□ -0.1
SDF2-201ENST00000247020 PCID2Q5JVF3 399 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 STXBP5Q5T5C0 1151 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 LGSNQ5TDP6 509 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 RNF219Q5W0B1 726 aaPredicted RBP14.41□□□□□ -0.1
SDF2-201ENST00000247020 PPP2R2DQ66LE6 453 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 METTL3Q86U44 580 aaKnown RBP14.41□□□□□ -0.1
SDF2-201ENST00000247020 PRPF39Q86UA1 669 aaKnown RBP14.41□□□□□ -0.1
SDF2-201ENST00000247020 DCAF4L2Q8NA75 395 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 OR52K2Q8NGK3 314 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 ARRDC2Q8TBH0 407 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 SH3RF2Q8TEC5 729 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 PPP2R3CQ969Q6 453 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 CENPTQ96BT3 561 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 TCEAL4Q96EI5 215 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 KIFC1Q9BW19 673 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 MUC3BQ9H195 1237 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 TLE6Q9H808 572 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 KIF9Q9HAQ2 790 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 SSU72Q9NP77 194 aaKnown RBP14.41□□□□□ -0.1
SDF2-201ENST00000247020 TDP1Q9NUW8 608 aa14.41□□□□□ -0.1
SDF2-201ENST00000247020 C2orf16Q68DN1 1984 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 USP12O75317 370 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 FAM155BO75949 473 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 EPOP01588 193 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 MMP2P08253 660 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 MDH1P40925 334 aaKnown RBP14.4□□□□□ -0.1
SDF2-201ENST00000247020 SERPINB9P50453 376 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 SLC18A1P54219 525 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 WNT3AP56704 352 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 ITKQ08881 620 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 CDH18Q13634 790 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 RALGPS1Q5JS13 557 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 FYB2Q5VWT5 728 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 DENND5AQ6IQ26 1287 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 MARK2Q7KZI7 788 aaKnown RBP14.4□□□□□ -0.1
SDF2-201ENST00000247020 MFN1Q8IWA4 741 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 BBS7Q8IWZ6 715 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 CARNMT1Q8N4J0 409 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 IPMKQ8NFU5 416 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 ACDQ96AP0 544 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 ALKBH8Q96BT7 664 aaKnown RBP14.4□□□□□ -0.1
SDF2-201ENST00000247020 RANBP9Q96S59 729 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 FICDQ9BVA6 458 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 CINPQ9BW66 212 aaPredicted RBP14.4□□□□□ -0.1
SDF2-201ENST00000247020 NKX2-4Q9H2Z4 354 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 SFXN1Q9H9B4 322 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 UBP1Q9NZI7 540 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 TBK1Q9UHD2 729 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 FAM169AQ9Y6X4 670 aa14.4□□□□□ -0.1
SDF2-201ENST00000247020 NRG2O14511 850 aaPredicted RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 PBX2P40425 430 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 CD86P42081 329 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 ATP1A2P50993 1020 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 NIPAL4Q0D2K0 466 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 KCNC3Q14003 757 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 ZNF77Q15935 545 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SKIDA1Q1XH10 827 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SLC5A9Q2M3M2 681 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 ADGRD2Q7Z7M1 963 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 CYP4X1Q8N118 509 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 PGBD5Q8N414 524 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.39□□□□□ -0.11
SDF2-201ENST00000247020 FIBINQ8TAL6 211 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 DDI1Q8WTU0 396 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 USP13Q92995 863 aaPredicted RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 MTBPQ96DY7 904 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 FEM1CQ96JP0 617 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 FEM1AQ9BSK4 669 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SPON2Q9BUD6 331 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SLC28A3Q9HAS3 691 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 KIAA1522Q9P206 1035 aaPredicted RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 PRKAG3Q9UGI9 489 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 OR51B4Q9Y5P0 310 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 RPS6KL1Q9Y6S9 549 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 LOC285095A0A1B0GVY8 99 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SLC9A3R1O14745 358 aaPredicted RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 PER2O15055 1255 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 PRPF4O43172 522 aaKnown RBP eCLIP14.39□□□□□ -0.112e-6■■■■□ 23.9
SDF2-201ENST00000247020 PMPCBO75439 489 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 ZMPSTE24O75844 475 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 KRT37O76014 449 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 KRT38O76015 456 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SERPINF2P08697 491 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 KRT15P19012 456 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 HLA-DPA1P20036 260 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 PLK1P53350 603 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 ARF5P84085 180 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 DSC2Q02487 901 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms