RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ZNF354CQ86Y25 554 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 LGI2Q8N0V4 545 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 SLC39A11Q8N1S5 342 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 PPHLN1Q8NEY8 458 aaKnown RBP18.75■□□□□ 0.59
HOXC11-201ENST00000243082 PTCD2Q8WV60 388 aaKnown RBP18.75■□□□□ 0.59
HOXC11-201ENST00000243082 ERP27Q96DN0 273 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 C7orf26Q96N11 449 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 ARNT2Q9HBZ2 717 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 MRM3Q9HC36 420 aaKnown RBP18.75■□□□□ 0.59
HOXC11-201ENST00000243082 SLC40A1Q9NP59 571 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 HSFX1Q9UBD0 423 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 CCDC195A0A1B0GUA6 201 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 F5H5T6 163 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 COCHO43405 550 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 RASSF9O75901 435 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 DLDP09622 509 aaKnown RBP18.74■□□□□ 0.59
HOXC11-201ENST00000243082 ARNTP27540 789 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 CD86P42081 329 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 OCRLQ01968 901 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 DSC2Q02487 901 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 SETDB1Q15047 1291 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 SPOUT1Q5T280 376 aaKnown RBP18.74■□□□□ 0.59
HOXC11-201ENST00000243082 HECTD3Q5T447 861 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 RFWD3Q6PCD5 774 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 KLHDC10Q6PID8 442 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 CFAP52Q8N1V2 620 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 PGBD5Q8N414 524 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 ACVR1CQ8NER5 493 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 RC3H2Q9HBD1 1191 aaKnown RBP18.74■□□□□ 0.59
HOXC11-201ENST00000243082 TMEM216Q9P0N5 145 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 SLC2A6Q9UGQ3 507 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 TIMM44O43615 452 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 SNNO75324 88 aaPredicted RBP18.74■□□□□ 0.59
HOXC11-201ENST00000243082 PROCP04070 461 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 ITKQ08881 620 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 DBN1Q16643 649 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 FASTKD1Q53R41 847 aaKnown RBP18.74■□□□□ 0.59
HOXC11-201ENST00000243082 TPGS2Q68CL5 300 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 CNTN4Q8IWV2 1026 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 ARRDC2Q8TBH0 407 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 TADA1Q96BN2 335 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 MYRFLQ96LU7 910 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 ZNF558Q96NG5 402 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 BEGAINQ9BUH8 593 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 ZNF395Q9H8N7 513 aaPredicted RBP18.74■□□□□ 0.59
HOXC11-201ENST00000243082 CAB39LQ9H9S4 337 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 CYP4F11Q9HBI6 524 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 VPS45Q9NRW7 570 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 TREX1Q9NSU2 369 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 NSMCE4AQ9NXX6 385 aa18.74■□□□□ 0.59
HOXC11-201ENST00000243082 TTC24A2A3L6 582 aaPredicted RBP18.73■□□□□ 0.59
HOXC11-201ENST00000243082 VAPBO95292 243 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 GABRB3P28472 473 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 RFC2P35250 354 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 DEFB103AP81534 67 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 MSLNQ13421 630 aaPredicted RBP18.73■□□□□ 0.59
HOXC11-201ENST00000243082 FAM117BQ6P1L5 589 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 NSMCE1Q8WV22 266 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 VPS39Q96JC1 886 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 C20orf27Q9GZN8 174 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 NACA2Q9H009 215 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 ZNF358Q9NW07 568 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 NUMBLQ9Y6R0 609 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 BPTFQ12830 3046 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 MYLKQ15746 1914 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 A0A0G2JND7 137 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 ABHD14A-ACY1A0A1B0GW23 586 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 E2F8A0AVK6 867 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 PRAMEF11O60813 436 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 CLTBP09497 229 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 HARS2P49590 506 aaKnown RBP18.73■□□□□ 0.59
HOXC11-201ENST00000243082 CSRP3P50461 194 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 LBRQ14739 615 aaKnown RBP18.73■□□□□ 0.59
HOXC11-201ENST00000243082 DLG2Q15700 870 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 CNGA3Q16281 694 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 MBLAC2Q68D91 279 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 ZC3HC1Q86WB0 502 aaKnown RBP18.73■□□□□ 0.59
HOXC11-201ENST00000243082 PLD6Q8N2A8 252 aaKnown RBP18.73■□□□□ 0.59
HOXC11-201ENST00000243082 SLC25A41Q8N5S1 370 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 TMEM169Q96HH4 297 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 YIPF1Q9Y548 306 aa18.73■□□□□ 0.59
HOXC11-201ENST00000243082 AHSGP02765 367 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 KLKB1P03952 638 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 MPOP05164 745 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 ITGB8P26012 769 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 ETFBP38117 255 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 SLC11A2P49281 568 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 ARFIP2P53365 341 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 GRM3Q14832 879 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 PCLAFQ15004 111 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 TTC31Q49AM3 519 aaPredicted RBP18.72■□□□□ 0.59
HOXC11-201ENST00000243082 ZCCHC23Q6ZST2 131 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 CLEC14AQ86T13 490 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 GPR22Q99680 433 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 HERC2P3Q9BVR0 1158 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 RNF38Q9H0F5 515 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 RHOJQ9H4E5 214 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 PDFQ9HBH1 243 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 GKN1Q9NS71 199 aa18.72■□□□□ 0.59
HOXC11-201ENST00000243082 TRPM5Q9NZQ8 1165 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms