RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 CLIP3Q96DZ5 547 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 OR52B2Q96RD2 323 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 ZNF518BQ9C0D4 1074 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 ILKAPQ9H0C8 392 aaPredicted RBP11.68□□□□□ -0.54
CCND1-201ENST00000227507 PCDHAC1Q9H158 963 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 C1orf21Q9H246 121 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 TASP1Q9H6P5 420 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 PADI3Q9ULW8 664 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 BNIP3LO60238 219 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 USP12O75317 370 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 C22orf31O95567 290 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 CKMT2P17540 419 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 CDH2P19022 906 aaPredicted RBP11.68□□□□□ -0.54
CCND1-201ENST00000227507 CRHR1P34998 444 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 NDST1P52848 882 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 TRIM16LQ309B1 348 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 ANKDD1AQ495B1 522 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 PTPN20Q4JDL3 420 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 LDLRAP1Q5SW96 308 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 OGFOD2Q6N063 350 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 TFAP2BQ92481 460 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 NOL11Q9H8H0 719 aaKnown RBP11.68□□□□□ -0.54
CCND1-201ENST00000227507 EFCAB1Q9HAE3 211 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 GIT1Q9Y2X7 761 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 COL4A1P02462 1669 aa11.68□□□□□ -0.54
CCND1-201ENST00000227507 KLF11O14901 512 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 ZBTB11O95625 1053 aaPredicted RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 NFICP08651 508 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 SMIM18P0DKX4 95 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 GRK2P25098 689 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 AVPR1AP37288 418 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 RECQLP46063 649 aaPredicted RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 PCYT1AP49585 367 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 SLC12A2P55011 1212 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 RALGDSQ12967 914 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 ADGRE1Q14246 886 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 CES4AQ5XG92 561 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 ARCQ7LC44 396 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 RNF135Q8IUD6 432 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 MCUQ8NE86 351 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 FNDC8Q8TC99 324 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 SENP8Q96LD8 212 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 INIPQ9NRY2 104 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 RNF19AQ9NV58 838 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 EIF3FO00303 357 aaPredicted RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 TNFSF9P41273 254 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 CSE1LP55060 971 aaKnown RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 NME5P56597 212 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 SLC15A3Q8IY34 581 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 LRTOMTQ8WZ04 291 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 UPF3AQ9H1J1 476 aaKnown RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 CAB39LQ9H9S4 337 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 DPP7Q9UHL4 492 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 RAB26Q9ULW5 256 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 AP4S1Q9Y587 144 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 SF3B1O75533 1304 aaKnown RBP eCLIP11.67□□□□□ -0.546e-6■■■■■ 103.4
CCND1-201ENST00000227507 PTPRJQ12913 1337 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 EFCAB14O75071 495 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 MGAT1P26572 445 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 CCND3P30281 292 aaPredicted RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 CASP2P42575 452 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 HSPA13P48723 471 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 TUFMP49411 452 aaKnown RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 ADRM1Q16186 407 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 PERM1Q5SV97 790 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 PACS1Q6VY07 963 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 RXFP2Q8WXD0 754 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 LPPQ93052 612 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 SPON2Q9BUD6 331 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 CNTN3Q9P232 1028 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 STK39Q9UEW8 545 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 FETUBQ9UGM5 382 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 DCDC2Q9UHG0 476 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 SLC39A10Q9ULF5 831 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 COQ6Q9Y2Z9 468 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 PFDN6O15212 129 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 ZBTB14O43829 449 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 CYBBP04839 570 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 CCL5P13501 91 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 NCAM1P13591 858 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 GPD1P21695 349 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 SCARA3Q6AZY7 606 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 MAMDC4Q6UXC1 1216 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 ADGRG6Q86SQ4 1221 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 YAF2Q8IY57 180 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 ZNF558Q96NG5 402 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 PGLYRP2Q96PD5 576 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 APOL2Q9BQE5 337 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 OSBPL6Q9BZF3 934 aa11.67□□□□□ -0.54
CCND1-201ENST00000227507 NXF3Q9H4D5 531 aaKnown RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 KLHL8Q9P2G9 620 aaPredicted RBP11.67□□□□□ -0.54
CCND1-201ENST00000227507 A0A1B0GUL6 1792 aa11.66□□□□□ -0.54
CCND1-201ENST00000227507 PLIN3O60664 434 aa11.66□□□□□ -0.54
CCND1-201ENST00000227507 VNN1O95497 513 aa11.66□□□□□ -0.54
CCND1-201ENST00000227507 LSM8O95777 96 aaKnown RBP11.66□□□□□ -0.54
CCND1-201ENST00000227507 ITGBL1O95965 494 aaPredicted RBP11.66□□□□□ -0.54
CCND1-201ENST00000227507 HMBSP08397 361 aa11.66□□□□□ -0.54
CCND1-201ENST00000227507 GSTT2P0CG29 244 aa11.66□□□□□ -0.54
CCND1-201ENST00000227507 GSTT2BP0CG30 244 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms