RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 IPMKQ8NFU5 416 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 SPATA22Q8NHS9 363 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 GABPB2Q8TAK5 448 aaPredicted RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 SCYL1Q96KG9 808 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 CDH22Q9UJ99 828 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 MAGED2Q9UNF1 606 aaPredicted RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 TARM1B6A8C7 271 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 INPPL1O15357 1258 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 POMCP01189 267 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 GRIA4P48058 902 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 LRRC8EQ6NSJ5 796 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 ACAD11Q709F0 780 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 RASAL3Q86YV0 1011 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 RTL3Q8N8U3 475 aaKnown RBP22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 FCRL2Q96LA5 508 aaPredicted RBP22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 C1orf74Q96LT6 269 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 NR1H4Q96RI1 486 aaPredicted RBP22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 OXCT2Q9BYC2 517 aaPredicted RBP22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 VCX3BQ9H321 246 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 PCDHB8Q9UN66 801 aa22.28■■□□□ 1.16
SMARCD2-201ENST00000225742 KCNU1A8MYU2 1149 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 TNFRSF10BO14763 440 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 DCXO43602 365 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 PDHA1P08559 390 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 SBK3P0C264 359 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 CYBAP13498 195 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 STMN1P16949 149 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 GABRB3P28472 473 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 CDC25CP30307 473 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 CD52P31358 61 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 SERPINB5P36952 375 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 CUL3Q13618 768 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 RALGPS1Q5JS13 557 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 KIAA0408Q6ZU52 694 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 PHTF2Q8N3S3 785 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 C2CD4AQ8NCU7 369 aaPredicted RBP22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 SCAMP5Q8TAC9 235 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 TREX1Q9NSU2 369 aa22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 RBM22Q9NW64 420 aaKnown RBP eCLIP22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 CPSF2Q9P2I0 782 aaKnown RBP22.27■■□□□ 1.16
SMARCD2-201ENST00000225742 FAM95CA0A1B0GW59 222 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 ZBTB14O43829 449 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 NPHS1O60500 1241 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 MGEA5O60502 916 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 SLC5A3P53794 718 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 HUNKP57058 714 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 HERC3Q15034 1050 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 ARTNQ5T4W7 220 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 MFSD14CQ5VZR4 134 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 SLC41A1Q8IVJ1 513 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 FBXW8Q8N3Y1 598 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 MAPK15Q8TD08 544 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 SERPINB11Q96P15 392 aa22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 PRPF19Q9UMS4 504 aaKnown RBP22.27■■□□□ 1.15
SMARCD2-201ENST00000225742 MAGEA13PA6NCF6 341 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 GOLGA8TH3BQL2 631 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 PHGDHO43175 533 aaKnown RBP22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 VAPBO95292 243 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 PIGNO95427 931 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 MT-CYBP00156 380 aaPredicted RBP22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 HLA-DQB2P05538 268 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 SLC2A3P11169 496 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 MPSTP25325 297 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 THPOP40225 353 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 CD151P48509 253 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 TUBP50607 506 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 XIAPP98170 497 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 POU4F1Q01851 419 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 DSG1Q02413 1049 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 POU6F1Q14863 301 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 RANBP10Q6VN20 620 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 FRMD7Q6ZUT3 714 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 TMC7Q7Z402 723 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 DEFB107AQ8IZN7 70 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 CENPLQ8N0S6 344 aaPredicted RBP22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 KCTD4Q8WVF5 259 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 CASP10Q92851 521 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 SPDL1Q96EA4 605 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 RANBP9Q96S59 729 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 ARNT2Q9HBZ2 717 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 ZFYVE28Q9HCC9 887 aa22.26■■□□□ 1.15
SMARCD2-201ENST00000225742 RGSL1A5PLK6 1076 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 E9PBE3 544 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 TK2O00142 265 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 KLHL41O60662 606 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 NEBLO76041 1014 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 BAG2O95816 211 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 GRIK1P39086 918 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 DNAJB13P59910 316 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 TBL3Q12788 808 aaKnown RBP22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 ILF2Q12905 390 aaKnown RBP22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 ARL13AQ5H913 290 aaPredicted RBP22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 TMEM154Q6P9G4 183 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 C16orf89Q6UX73 402 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 SCD5Q86SK9 330 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 FSTL5Q8N475 847 aaPredicted RBP22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 RP9Q8TA86 221 aaKnown RBP22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 CALML6Q8TD86 181 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms