RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 RCN1Q15293 331 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 ZCCHC9Q8N567 271 aaKnown RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 EFCAB3Q8N7B9 438 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 SELENOMQ8WWX9 145 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 TMEM51Q9NW97 253 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 hCG_2014768A0A024R1R8 64 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 A0A087X1B8 175 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 H3BMM5 538 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 ATRNO75882 1429 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 KCNA3P22001 575 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 FASTKQ14296 549 aaKnown RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 PPP2R2DQ66LE6 453 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 ZCCHC8Q6NZY4 707 aaKnown RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 AFTPHQ6ULP2 937 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 DNAJC9Q8WXX5 260 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 S100A5P33763 92 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 GSSP48637 474 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 RNF148Q8N7C7 305 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 C12orf50Q8NA57 414 aaPredicted RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 ABCG4Q9H172 646 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 CCDC167Q9P0B6 97 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 PTPRJQ12913 1337 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 A0A088AWK7 358 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 SMNDC1O75940 238 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 CCDC159P0C7I6 412 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 ATP6V1B1P15313 513 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 ZNF10P21506 573 aaPredicted RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 GULP1Q9UBP9 304 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 PDE2AO00408 941 aaPredicted RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 RGS14O43566 566 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 PSMD8P48556 350 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 PARGQ86W56 976 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 DEFB107AQ8IZN7 70 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 UPF1Q92900 1129 aaKnown RBP eCLIP18.66■□□□□ 0.585e-7■■■■□ 22.8
CLIP2-201ENST00000223398 GFM2Q969S9 779 aaKnown RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 ARMC7Q9H6L4 198 aa18.66■□□□□ 0.58
CLIP2-201ENST00000223398 MAFBQ9Y5Q3 323 aaPredicted RBP18.66■□□□□ 0.58
CLIP2-201ENST00000223398 PAPSS1O43252 624 aaPredicted RBP18.65■□□□□ 0.58
CLIP2-201ENST00000223398 COX7A2P14406 83 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 NOS3P29474 1203 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 ZNF655Q8N720 491 aaPredicted RBP18.65■□□□□ 0.58
CLIP2-201ENST00000223398 ROGDIQ9GZN7 287 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 EVA1BQ9NVM1 165 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 NDUFAF1Q9Y375 327 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 N6AMT1Q9Y5N5 214 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 CHADO15335 359 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 B4GALT4O60513 344 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 EPHX1P07099 455 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 TSPAN8P19075 237 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 PBX3P40426 434 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 SKP1P63208 163 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 LRP10Q7Z4F1 713 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 POU5F2Q8N7G0 328 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 ZNF670Q9BS34 389 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 OSBPL10Q9BXB5 764 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 C1RP00736 705 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 CDK18Q07002 472 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 CDK20Q8IZL9 346 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 NIFKQ9BYG3 293 aaKnown RBP18.65■□□□□ 0.58
CLIP2-201ENST00000223398 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.65■□□□□ 0.58
CLIP2-201ENST00000223398 TRBV23OR9-2A0A075B6M9 112 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 MBTD1Q05BQ5 628 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 LINGO4Q6UY18 593 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 DPEP3Q9H4B8 488 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 CHKBQ9Y259 395 aa18.65■□□□□ 0.58
CLIP2-201ENST00000223398 STBD1O95210 358 aa18.64■□□□□ 0.58
CLIP2-201ENST00000223398 LTA4HP09960 611 aaKnown RBP18.64■□□□□ 0.58
CLIP2-201ENST00000223398 RPA3P35244 121 aaPredicted RBP18.64■□□□□ 0.58
CLIP2-201ENST00000223398 CTBP1Q13363 440 aa18.64■□□□□ 0.58
CLIP2-201ENST00000223398 INTS6LQ5JSJ4 861 aaKnown RBP18.64■□□□□ 0.58
CLIP2-201ENST00000223398 IFNLR1Q8IU57 520 aaPredicted RBP18.64■□□□□ 0.58
CLIP2-201ENST00000223398 PTGR2Q8N8N7 351 aaPredicted RBP18.64■□□□□ 0.58
CLIP2-201ENST00000223398 CERS2Q96G23 380 aa18.64■□□□□ 0.58
CLIP2-201ENST00000223398 ZNF510Q9Y2H8 683 aa18.64■□□□□ 0.58
CLIP2-201ENST00000223398 RASSF10A6NK89 507 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 PIGNO95427 931 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 APOA1P02647 267 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 UMPSP11172 480 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 BMT2Q1RMZ1 405 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 GATAD2AQ86YP4 633 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 C4orf32Q8N8J7 132 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 STAG3L4Q8TBR4 150 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 TBCDQ9BTW9 1192 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 H0Y858 1186 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 M0R3G1 203 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 CACNB4O00305 520 aaPredicted RBP18.64■□□□□ 0.57
CLIP2-201ENST00000223398 GRM6O15303 877 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 MAN1A2O60476 641 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 RNASEH2AO75792 299 aaKnown RBP18.64■□□□□ 0.57
CLIP2-201ENST00000223398 GNRH1P01148 92 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 UGT2B4P06133 528 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 SLC35G4P0C7Q5 338 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 HPCAL1P37235 193 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 TTPAP49638 278 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 ACLYP53396 1101 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 SLC25A52Q3SY17 297 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 PTPN20Q4JDL3 420 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 LRRN4CLQ8ND94 238 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms