RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TBC1D3FA6NER0 549 aaPredicted RBP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D3LB9A6J9 549 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 INPP4BO15327 924 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 OR10H2O60403 315 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 HNRNPCP07910 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 GJB1P08034 283 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D3HP0C7X1 549 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 SPATA31D3P0C874 917 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 PRKAG1P54619 331 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 PFKFB4Q16877 469 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D3GQ6DHY5 549 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D3CQ6IPX1 549 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 KYAT3Q6YP21 454 aaKnown RBP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 SPATA31D4Q6ZUB0 917 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D3Q8IZP1 549 aaPredicted RBP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 ETNPPLQ8TBG4 499 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 UGT2B28Q9BY64 529 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D14Q9P2M4 693 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 ADAM30Q9UKF2 790 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 KDM4FA0A1W2PPD8 638 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 FARP2O94887 1054 aaPredicted RBP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 NQO1P15559 274 aaKnown RBP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 CASP5P51878 434 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 MRPS5P82675 430 aaKnown RBP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 FAM124AQ86V42 546 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 DHFR2Q86XF0 187 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 GLMNQ92990 594 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 CAVIN3Q969G5 261 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 MYOCQ99972 504 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 NRDE2Q9H7Z3 1164 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 SLC24A3Q9HC58 644 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 SIK3Q9Y2K2 1263 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 DERAQ9Y315 318 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 RIC1Q4ADV7 1423 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 MRPS35P82673 323 aaKnown RBP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 DGKZQ13574 1117 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 FAM187BQ17R55 369 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 PAGE2Q7Z2X7 111 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 DUSP16Q9BY84 665 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 AP3M1Q9Y2T2 418 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 OR10H1Q9Y4A9 318 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 ARIH1Q9Y4X5 557 aaPredicted RBP19.16■□□□□ 0.66
SMPD3-201ENST00000219334 DEC1Q9P2X7 70 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 SPATA31D1Q6ZQQ2 1576 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 ARF4P18085 180 aaPredicted RBP19.15■□□□□ 0.66
SMPD3-201ENST00000219334 CLCN5P51795 746 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 RGS1Q08116 209 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 DUSP4Q13115 394 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 ADRM1Q16186 407 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 KLHL35Q6PF15 583 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 NEK10Q6ZWH5 1172 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 ZCCHC9Q8N567 271 aaKnown RBP19.15■□□□□ 0.66
SMPD3-201ENST00000219334 RNF157Q96PX1 679 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 SYT17Q9BSW7 474 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 CHST7Q9NS84 486 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMPD3-201ENST00000219334 TAF13Q15543 124 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 ALG11Q2TAA5 492 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 SLC9A9Q8IVB4 645 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 BSNDQ8WZ55 320 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 SLC25A23Q9BV35 468 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 NXF3Q9H4D5 531 aaKnown RBP19.15■□□□□ 0.66
SMPD3-201ENST00000219334 GSAPA4D1B5 854 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 FKBP6O75344 327 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 GET4Q7L5D6 327 aaPredicted RBP19.15■□□□□ 0.66
SMPD3-201ENST00000219334 SCAIQ8N9R8 606 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 C10orf88Q9H8K7 445 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 CFAP97Q9P2B7 532 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 N6AMT1Q9Y5N5 214 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 HIST1H2ABP04908 130 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 ANXA6P08133 673 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 HIST3H2AQ7L7L0 130 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 HIST1H2ACQ93077 130 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 STMN3Q9NZ72 180 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 RWDD3Q9Y3V2 267 aa19.15■□□□□ 0.66
SMPD3-201ENST00000219334 NEDD8-MDP1E9PL57 170 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 CLDN5O00501 218 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 ELFN1P0C7U0 828 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 LPOP22079 712 aaPredicted RBP19.14■□□□□ 0.66
SMPD3-201ENST00000219334 PTPN4P29074 926 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 MATKP42679 507 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 BRMS1LQ5PSV4 323 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 NPNTQ6UXI9 565 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 NAT16Q8N8M0 369 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 OR5B17Q8NGF7 314 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 GPR152Q8TDT2 470 aa19.14■□□□□ 0.66
SMPD3-201ENST00000219334 SAC3D1A6NKF1 404 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 FRG1Q14331 258 aaKnown RBP19.14■□□□□ 0.65
SMPD3-201ENST00000219334 GRM3Q14832 879 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 PTPRNQ16849 979 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 INTS11Q5TA45 600 aaKnown RBP19.14■□□□□ 0.65
SMPD3-201ENST00000219334 TATDN1Q6P1N9 297 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 ZNF670Q9BS34 389 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 PRDM12Q9H4Q4 367 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 FBXO6Q9NRD1 293 aaPredicted RBP19.14■□□□□ 0.65
SMPD3-201ENST00000219334 BTBD7Q9P203 1132 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 INVSQ9Y283 1065 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 NEK3P51956 506 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 ZNF697Q5TEC3 545 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms