RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 UBP1Q9NZI7 540 aa16.21■□□□□ 0.18
SNRPD3-201ENST00000215829 EPS15L1Q9UBC2 864 aa16.21■□□□□ 0.18
SNRPD3-201ENST00000215829 MUSKO15146 869 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 ECI2O75521 394 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 SASH3O75995 380 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 MT-CYBP00156 380 aaPredicted RBP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 PABPC1P11940 636 aaKnown RBP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 MLNP12872 115 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 PSMC3P17980 439 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 GRIA1P42261 906 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 GEMP55040 296 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 GEMIN4P57678 1058 aaKnown RBP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 NIPAL4Q0D2K0 466 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 SPARCL1Q14515 664 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 UAP1Q16222 522 aaPredicted RBP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 ALG1LQ6GMV1 187 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 KIAA0907Q7Z7F0 614 aaPredicted RBP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 YAF2Q8IY57 180 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 NAT16Q8N8M0 369 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 ARRDC2Q8TBH0 407 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 UBLCP1Q8WVY7 318 aaPredicted RBP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 FGF14Q92915 247 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 XPO6Q96QU8 1125 aaKnown RBP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 KXD1Q9BQD3 176 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 MGME1Q9BQP7 344 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 CDC42EP4Q9H3Q1 356 aaKnown RBP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 ECT2Q9H8V3 914 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 LRRC40Q9H9A6 602 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 VIPAS39Q9H9C1 493 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 GGA2Q9UJY4 613 aa16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 KIF26AQ9ULI4 1882 aaPredicted RBP16.2■□□□□ 0.18
SNRPD3-201ENST00000215829 XIRP2A4UGR9 3374 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 AVILO75366 819 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 MAGEA3P43357 314 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 DSC2Q02487 901 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 SLC20A2Q08357 652 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 DMC1Q14565 340 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 BBS9Q3SYG4 887 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 MTSS1LQ765P7 747 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 PRPF39Q86UA1 669 aaKnown RBP16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 ZBED8Q8IZ13 594 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 MYLIPQ8WY64 445 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 CDX2Q99626 313 aaPredicted RBP16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 HPS4Q9NQG7 708 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 VPS45Q9NRW7 570 aa16.19■□□□□ 0.18
SNRPD3-201ENST00000215829 OTOL1A6NHN0 477 aaPredicted RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 TMCC1O94876 653 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 TTC4O95801 387 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 MT-CO1P00395 513 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 MMP2P08253 660 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 CISD3P0C7P0 127 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 MPP3Q13368 585 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 MTM1Q13496 603 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 GRM2Q14416 872 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 CCDC85BQ15834 202 aaPredicted RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 FUT11Q495W5 492 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 DNAJC21Q5F1R6 531 aaKnown RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 NAPEPLDQ6IQ20 393 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 IQCKQ8N0W5 287 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 TADA1Q96BN2 335 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 SEMA3CQ99985 751 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 EPB41L4BQ9H329 900 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 BRWD1Q9NSI6 2320 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 SPTBN5Q9NRC6 3674 aaKnown RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 GRXCR2A6NFK2 248 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 RIPK2O43353 540 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 BANF1O75531 89 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 KCNA5P22460 613 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 CES1P23141 567 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 CD86P42081 329 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 SERPINH1P50454 418 aaKnown RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 SULT2A1Q06520 285 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 NSUN2Q08J23 767 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 NR1H3Q13133 447 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 FASTKD3Q14CZ7 662 aaKnown RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 KYNUQ16719 465 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 HP1BP3Q5SSJ5 553 aaPredicted RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 ALS2CLQ60I27 953 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 KDELC1Q6UW63 502 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 Q7L0L9 218 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 LINC00523Q86TU6 105 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 METTL3Q86U44 580 aaKnown RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 ADIPOR2Q86V24 386 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 ETFBKMTQ8IXQ9 262 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 AHI1Q8N157 1196 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 PYROXD1Q8WU10 500 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 C9orf72Q96LT7 481 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 RPP25Q9BUL9 199 aaKnown RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 UBE2ZQ9H832 354 aaPredicted RBP16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 CASS4Q9NQ75 786 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 NINJ2Q9NZG7 142 aa16.18■□□□□ 0.18
SNRPD3-201ENST00000215829 TTC24A2A3L6 582 aaPredicted RBP16.17■□□□□ 0.18
SNRPD3-201ENST00000215829 ANHXE9PGG2 379 aa16.17■□□□□ 0.18
SNRPD3-201ENST00000215829 TRIM24O15164 1050 aa16.17■□□□□ 0.18
SNRPD3-201ENST00000215829 USP12O75317 370 aa16.17■□□□□ 0.18
SNRPD3-201ENST00000215829 PMPCBO75439 489 aa16.17■□□□□ 0.18
SNRPD3-201ENST00000215829 CR2P20023 1033 aa16.17■□□□□ 0.18
SNRPD3-201ENST00000215829 ADRA1AP35348 466 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms