RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 TLR4O00206 839 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ATMINO43313 823 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 DESP17661 470 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CSKP41240 450 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 IRAK1P51617 712 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CCR5P51681 352 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 RPL7AP62424 266 aaKnown RBP19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ZNF177Q13360 481 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 HNRNPA1L2Q32P51 320 aaKnown RBP19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 C5orf22Q49AR2 442 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 PITRM1Q5JRX3 1037 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 PPP1R15BQ5SWA1 713 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 MMAAQ8IVH4 418 aaKnown RBP19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 VSTM4Q8IW00 320 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CACTIN-AS1Q8N1I8 211 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 OXR1Q8N573 874 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 RFFLQ8WZ73 363 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ZNF653Q96CK0 615 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 NAF1Q96HR8 494 aaKnown RBP19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 PARVAQ9NVD7 372 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CNOT8Q9UFF9 292 aaKnown RBP19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 FZD4Q9ULV1 537 aa19.37■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CCP110O43303 1012 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CLDN11O75508 207 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ASLP04424 464 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 PLEKP08567 350 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 TPM1P09493 284 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ADRA1BP35368 520 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 RXRGP48443 463 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ZNF143P52747 638 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CDH4P55283 916 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 OXCT1P55809 520 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 HDAC4P56524 1084 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 INSM1Q01101 510 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 RHDQ02161 417 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 MAMLD1Q13495 774 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 SLC12A1Q13621 1099 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 BROXQ5VW32 411 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 PLEKHA7Q6IQ23 1121 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 KDM7AQ6ZMT4 941 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ZNF683Q8IZ20 524 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 DCBLD1Q8N8Z6 715 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ZNF248Q8NDW4 579 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 TTC17Q96AE7 1141 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 TRIM11Q96F44 468 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 MYO19Q96H55 970 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ISCUQ9H1K1 167 aa19.36■□□□□ 0.69
TRAPPC6A-201ENST00000006275 DRGXA6NNA5 263 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 SRGAP2O75044 1071 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CNTN5O94779 1100 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 SLC8A1P32418 973 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 PSMD8P48556 350 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 PCBP4P57723 403 aaKnown RBP19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 TMPRSS3P57727 454 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CXorf57Q6NSI4 855 aaKnown RBP19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 SARM1Q6SZW1 724 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 APCDD1Q8J025 514 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 OR8K1Q8NGG5 319 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 OR14C36Q8NHC7 312 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 PPP1R9BQ96SB3 815 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CNPY3Q9BT09 278 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 TRIM5Q9C035 493 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ERVMER34-1Q9H9K5 563 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ARHGAP20Q9P2F6 1191 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 MYO1AQ9UBC5 1043 aa19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 TPX2Q9ULW0 747 aaKnown RBP19.35■□□□□ 0.69
TRAPPC6A-201ENST00000006275 MT-CO3P00414 261 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 MYBL1P10243 752 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ACP1P24666 158 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 MZF1P28698 734 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 HNRNPH3P31942 346 aaKnown RBP19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 NUMBP49757 651 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ADPRHP54922 357 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 UCNP55089 124 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ALFQ53S48 1182 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 C9orf64Q5T6V5 341 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ARHGAP40Q5TG30 622 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 SCYL2Q6P3W7 929 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 CCDC185Q8N715 623 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 WBP1Q96G27 269 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 MPP6Q9NZW5 540 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 ERVW-1Q9UQF0 538 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 SCINQ9Y6U3 715 aa19.34■□□□□ 0.69
TRAPPC6A-201ENST00000006275 IGLV3-10A0A075B6K4 115 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 SDC3O75056 442 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 GOT1P17174 413 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 PSMA2P25787 234 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 PLK1P53350 603 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 E2F1Q01094 437 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 OGDHQ02218 1023 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 TSR1Q2NL82 804 aaKnown RBP19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 PROX2Q3B8N5 592 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 RNF219Q5W0B1 726 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 NAPEPLDQ6IQ20 393 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 KANSL1Q7Z3B3 1105 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 TMC6Q7Z403 805 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 SLFN11Q7Z7L1 901 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 SPATS2Q86XZ4 545 aaKnown RBP19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 DRC7Q8IY82 874 aa19.33■□□□□ 0.68
TRAPPC6A-201ENST00000006275 AADATQ8N5Z0 425 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms