RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 BOLA2-SMG1P6H3BVE0 249 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 TRMUO75648 421 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 DDHD2O94830 711 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 ERCC2P18074 760 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 HSPA13P48723 471 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 NDUFV1P49821 464 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 RABGGTBP53611 331 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 RALGDSQ12967 914 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 PDAP1Q13442 181 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 ANO4Q32M45 955 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 SLC25A52Q3SY17 297 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 MGAT5BQ3V5L5 792 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 KRT80Q6KB66 452 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 KLC3Q6P597 504 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 LAYNQ6UX15 382 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 C14orf80Q86SX3 495 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 PIGZQ86VD9 579 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 SLC15A3Q8IY34 581 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 MYO1HQ8N1T3 1032 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 TMEM102Q8N9M5 508 aaPredicted RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 TSPAN14Q8NG11 270 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 GRIN3AQ8TCU5 1115 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 ZNF512Q96ME7 567 aaPredicted RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 MPHOSPH6Q99547 160 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 SNX25Q9H3E2 840 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 SETD4Q9NVD3 440 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 PLK2Q9NYY3 685 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 TDRKHQ9Y2W6 561 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 SNX13Q9Y5W8 968 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 CEP350Q5VT06 3117 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 DOCK1Q14185 1865 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 C7orf72A4D263 438 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 CABYRO75952 493 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 STAU1O95793 577 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 SBK3P0C264 359 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 HDCP19113 662 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 NFKB1P19838 968 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 PSME3P61289 254 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 PPIDQ08752 370 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 SYPL2Q5VXT5 272 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 ARHGAP17Q68EM7 881 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 DUS1LQ6P1R4 473 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 USP33Q8TEY7 942 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 LZICQ8WZA0 190 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 UPF1Q92900 1129 aaKnown RBP eCLIP10.66□□□□□ -0.72e-14■■■■■ 76.7
CX3CL1-201ENST00000006053 PPWD1Q96BP3 646 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 TMEM79Q9BSE2 394 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 NFKBIZQ9BYH8 718 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 AP4S1Q9Y587 144 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 A0A0J9YVX5 310 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 TCAF2A6NFQ2 919 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 CLDN5O00501 218 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 TRIM38O00635 465 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 DLX3O60479 287 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 ZNF286BP0CG31 522 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 HNRNPLP14866 589 aaKnown RBP eCLIP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 SLC26A2P50443 739 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 CSE1LP55060 971 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 ADARP55265 1226 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 APOFQ13790 326 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 TMEM53Q6P2H8 277 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 MOB2Q70IA6 237 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 LSMEM2Q8N112 164 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 SDR16C5Q8N3Y7 309 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 MLPHQ9BV36 600 aaPredicted RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 UTP6Q9NYH9 597 aaKnown RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 RCOR3Q9P2K3 495 aaPredicted RBP10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 GTF2IRD1Q9UHL9 959 aa10.66□□□□□ -0.7
CX3CL1-201ENST00000006053 TMEM247A6NEH6 219 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 E7ENX8 843 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 ACOT8O14734 319 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 APOA4P06727 396 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 RPS12P25398 132 aaKnown RBP10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 NFKBIAP25963 317 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 ACADSBP45954 432 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 CTBP1Q13363 440 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 KYAT1Q16773 422 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 CPSF7Q8N684 471 aaKnown RBP10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 BEST2Q8NFU1 509 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 SLC7A14Q8TBB6 771 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 TRPM4Q8TD43 1214 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 NXNL1Q96CM4 212 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 SPON1Q9HCB6 807 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 CASS4Q9NQ75 786 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 ANLNQ9NQW6 1124 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 PIGVQ9NUD9 493 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 KLK14Q9P0G3 267 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 THEGQ9P2T0 379 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 VTI1BQ9UEU0 232 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 VPS28Q9UK41 221 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 RNF11Q9Y3C5 154 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 CEPT1Q9Y6K0 416 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 NEMP2A6NFY4 417 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 MT-CO1P00395 513 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 ZNF26P17031 533 aaPredicted RBP10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 CDH2P19022 906 aaPredicted RBP10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 TKTP29401 623 aaKnown RBP10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 CD68P34810 354 aaPredicted RBP10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 TPI1P60174 286 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 PRAMEP78395 509 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms