RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Pym1Q8CHP5 203 aaKnown RBP9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Akr1c18Q8K023 323 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Slc44a4Q91VA1 707 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Usb1Q91W78 267 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Yaf2Q99LW6 179 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Dnaja4Q9JMC3 397 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm20425E9Q035 978 aaKnown RBP9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Trim15G3UY57 292 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Stmn3O70166 180 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Hipk1O88904 1210 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Dnajb5O89114 348 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Tbx1P70323 479 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Eif2ak2Q03963 515 aaKnown RBP9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 StyxQ60969 223 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Smg5Q6ZPY2 1017 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Trpv1Q704Y3 839 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rfx4Q7TNK1 735 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ddhd1Q80YA3 547 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Hus1Q8BQY8 280 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 LaynQ8C351 381 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Bcl7bQ921K9 202 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Fam227aQ9D3V8 625 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rnf4Q9QZS2 194 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 ClcnkaQ9WUB7 687 aa9.07□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ect2lA0A140LIP2 953 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 JhyE9Q793 770 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 ArafP04627 604 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Hnf1aP22361 628 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Traf2P39429 501 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rps26P62855 115 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rnf180Q3U827 592 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Lrrc14bQ3UJB3 510 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Papss1Q60967 624 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rpa2Q62193 270 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Tas2r124Q7M718 309 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Tas2r13Q7M720 305 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Slc41a1Q8BJA2 512 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 GmppbQ8BTZ7 360 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Recql5Q8VID5 982 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Hyal1Q91ZJ9 462 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Coa7Q921H9 231 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Creb3l4Q9D2A5 370 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 OxsmQ9D404 459 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ampd2Q9DBT5 798 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ndst4Q9EQW8 872 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Slc26a3Q9WVC8 757 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Vmn2r54K7N649 806 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Psmd4O35226 376 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Vps4bP46467 444 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 GipP48756 144 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pald1P70261 859 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Slc9a3r1P70441 355 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 NptnP97300 397 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ncf4P97369 339 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Phf12Q5SPL2 1003 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Hdac10Q6P3E7 666 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ccdc36Q6PDM4 574 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cd3eapQ76KJ5 399 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Sec24bQ80ZX0 1251 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Phf21bQ8C966 487 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Csnka2ipQ8CH19 720 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pdcd10Q8VE70 212 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Smurf1Q9CUN6 731 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Atad1Q9D5T0 361 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ppa1Q9D819 289 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cts6Q9ET52 334 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nufip1Q9QXX8 484 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm29094F6Q785 221 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Capza1P47753 286 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cyp2c40P56657 491 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ermp1Q3UVK0 898 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Sema4aQ62178 760 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cyp26b1Q811W2 512 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Zdhhc15Q8BGJ0 337 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ahsa1Q8BK64 338 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ubqln3Q8C5U9 658 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Uhrf1Q8VDF2 782 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pgm3Q9CYR6 542 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pramef12Q9D2F1 463 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cdc34bA0A140T8I4 237 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm13101A2ASJ0 481 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Taf4E9QAP7 1042 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 F830016B08RikG3UWE2 416 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Serpinb9cI7HJI5 387 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Mdh2P08249 338 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Slc2a3P32037 493 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Dcaf7P61963 342 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rps17P63276 135 aaKnown RBP9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 UtyP79457 1212 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ptprn2P80560 1001 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Arhgap9Q1HDU4 648 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 MyrfQ3UR85 1138 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Spag6Q3V0U9 509 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 CrkQ64010 304 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ptx4Q6RUU0 478 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ece2Q80Z60 881 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Tmem177Q8BPE4 311 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 St8sia6Q8K4T1 398 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Olfr1052Q8VGR8 312 aa9.06□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pbp2Q8VIN1 187 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms