RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ddx18Q8K363 660 aaKnown RBP23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Yaf2Q99LW6 179 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Fgfr1op2Q9CRA9 253 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Hsf2bpQ9D4G2 338 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Slxl1Q9D515 155 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Mpp6Q9JLB0 553 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Chrna6Q9R0W9 494 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Igkv16-104A0A0B4J1I1 116 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Arfip1G5E8V9 373 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Dbx1P52950 335 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tubgcp3P58854 905 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Cd300lgQ1ERP8 331 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Prickle1Q3U5C7 832 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Parp6Q6P6P7 630 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Ip6k2Q80V72 448 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Pdik1lQ8QZR7 341 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Setd7Q8VHL1 366 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Emid1Q91VF5 444 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Pcdhb18Q91Y02 792 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tex9Q9D845 387 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tk2Q9R088 270 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Pdcd7Q9WTY1 482 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 PtprdQ64487 1912 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Nfkb1P25799 971 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tead2P48301 445 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Cd244Q07763 397 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Taar7eQ5QD09 358 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Runx3Q64131 409 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Stambpl1Q76N33 436 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Zbtb41Q811F1 908 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Zfp62Q8C827 914 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Mta1Q8K4B0 715 aaKnown RBP23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Adi1Q99JT9 179 aa23.24■■□□□ 1.31
Upf3a-201ENSMUST00000043767 H2-T24F8VQG4 363 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Chrna4O70174 629 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tcf3P15806 651 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 VegfcP97953 415 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tmem255bQ5FW56 369 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Grik1Q60934 836 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 ScapQ6GQT6 1276 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 MregQ6NVG5 214 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Rimbp2Q80U40 1072 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Chmp2bQ8BJF9 213 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tbrg4Q91YM4 630 aaKnown RBP23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Setd6Q9CWY3 473 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Itga9B8JK39 1036 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 E2f6O54917 272 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Ctbp1O88712 441 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Cd2P08920 344 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 RcvrnP34057 202 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Lcp1Q61233 627 aaKnown RBP23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Olfr1080Q7TR67 313 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Psapl1Q8C1C1 522 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Mfsd10Q9D2V8 456 aaKnown RBP23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Fam227bQ9D518 532 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 NfkbizQ9EST8 728 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Mpp5Q9JLB2 675 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 C1qtnf1Q9QXP7 281 aa23.23■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Psma3O70435 255 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Sstr1P30873 391 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Elk3P41971 409 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Mapkapk2P49138 386 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Gabpb1Q00420 383 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Lmf1Q3U3R4 574 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Gpd1lQ3ULJ0 351 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Rbm22Q8BHS3 420 aaKnown RBP23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Noc4lQ8BHY2 516 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Mettl21cQ8BLU2 248 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Vmn1r18Q8R2C8 299 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Q9D1F3 157 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Neu2Q9JMH3 379 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 SufuQ9Z0P7 484 aa23.22■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Gm21962L7N280 338 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tap1P21958 724 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Ripk2P58801 539 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Zbtb14Q08376 449 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 IqcmQ149I8 489 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Alkbh5Q3TSG4 395 aaKnown RBP23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Trmt10cQ3UFY8 414 aaKnown RBP23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Foxred2Q3USW5 665 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Trit1Q80UN9 467 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Zfp719Q8BIV1 735 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Adam33Q923W9 797 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Prss23Q9D6X6 382 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Znf654Q9DAU9 571 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 XkQ9QXY7 446 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Card9A2AIV8 536 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 ChkaO54804 453 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 TshrP47750 764 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Plk2P53351 682 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Gjb5Q02739 271 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Rcn1Q05186 325 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 CblbQ3TTA7 982 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Frem3Q5H8B9 2123 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 HiraQ61666 1015 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Gpr17Q6NS65 339 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Znf365Q8BG89 408 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Ubap1Q8BH48 502 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 C5ar2Q8BW93 344 aa23.21■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Lars2Q8VDC0 902 aa23.21■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms