RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Kcnn4O89109 425 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Col6a2Q02788 1034 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Zbtb14Q08376 449 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 AcdQ5EE38 416 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Klhl35Q9CZ49 574 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 NckipsdQ9ESJ4 714 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Myh13B1AR69 1938 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rrn3B2RS91 656 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dcpp2E9PYC2 171 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Olfr694K7N641 315 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dcpp1L7N1X9 171 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ncam2O35136 837 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rab3ipQ68EF0 428 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nrg1Q6DR99 700 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tecpr1Q80VP0 1166 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mapk8Q91Y86 384 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Lgals2Q9CQW5 130 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 QkiQ9QYS9 341 aaKnown RBP12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Syt5Q9R0N5 386 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slc4a11A2AJN7 862 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gm10717D3Z1I8 228 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Hmgxb3G3X9M3 1254 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pik3r2O08908 722 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pik3cdO35904 1043 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Bnc1O35914 961 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Adcy1O88444 1118 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Htr3aP23979 487 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nrp1P97333 923 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fmo3P97501 534 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nt5dc3Q3UHB1 546 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 ChukQ60680 745 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ddhd1Q80YA3 547 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Zfp438Q8BFX2 798 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Acad10Q8K370 1069 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fam212aQ9CX62 282 aa12.02□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pgk1P09411 417 aaKnown RBP12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 S100a13P97352 98 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Trmt1Q3TX08 663 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Uimc1Q5U5Q9 727 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zfp91Q62511 572 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Dus1lQ8C2P3 475 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Samd3Q8C4H2 520 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Acsl5Q8JZR0 683 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Actr8Q8R2S9 624 aaKnown RBP12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Olfr1302Q8VGE9 315 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Stap1Q9JM90 297 aaKnown RBP12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Casz1Q9CWL2 1761 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zcchc7B1AX39 541 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Smok3aC0HKC8 504 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Smok3bC0HKC9 504 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pbx3O35317 434 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fdft1P53798 416 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Epas1P97481 874 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pdcd1Q02242 288 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Slc17a7Q3TXX4 560 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zfp217Q3U0X6 1041 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Sfr1Q8BP27 319 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Prkaa2Q8BRK8 552 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Adgrf1Q8VEC3 908 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Caskin2Q8VHK1 1201 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Chmp1b1Q99LU0 199 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pdzd8B9EJ80 1147 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm7942L7N277 499 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Plk2P53351 682 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 CenplQ3U3S3 329 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ssx9Q6XAS3 170 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mtmr12Q80TA6 747 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cyth4Q80YW0 393 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pcdhac2Q91Y09 1006 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pcdha2Q91Y17 948 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 CygbQ9CX80 190 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Coro1cQ9WUM4 474 aa12.02□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Kctd14A0A0U1RNG7 287 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Iqca1lA6H690 825 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cdc6O89033 562 aaKnown RBP12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Glt6d1Q2NKH9 311 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Hspa1aQ61696 641 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mis18bp1Q80WQ8 998 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ssh3Q8K330 649 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Trib2Q8K4K3 343 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Evi2bQ8VD58 444 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 CrygnQ8VHL5 183 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zdhhc24Q6IR37 284 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rasa4Q6PFQ7 802 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ssxb3Q6XAS4 170 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Arhgap11aQ80Y19 987 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Q8CIL4 281 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tcf25Q8R3L2 676 aaKnown RBP12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mcrs1Q99L90 462 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Slfn3A0A1L1STQ7 640 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 ShdO88834 343 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cdk7Q03147 346 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Abcd2Q61285 741 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pcdh19Q80TF3 1145 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Adam29Q811Q4 763 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tbc1d14Q8CGA2 694 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Utp6Q8VCY6 597 aaKnown RBP12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 TcimQ9D915 106 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Glipr1l1Q9DAG6 236 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Scamp5Q9JKD3 235 aa12.01□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms