RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 P01644 108 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 P01645 108 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 P01646 108 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 P01647 108 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Acvr2bP27040 536 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 ItgavP43406 1044 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Aldh3a1P47739 453 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Echs1Q8BH95 290 aaKnown RBP17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 GhdcQ99J23 532 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Tmbim4Q9DA39 238 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Foxe3Q9QY14 288 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Pdzd7E9Q9W7 1021 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Olfr603L7N1Y4 312 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 EsrraO08580 422 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 PenkP22005 268 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Casp2P29594 452 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 DesP31001 469 aaKnown RBP17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Eml1Q05BC3 814 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Scn2bQ56A07 215 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Slc6a4Q60857 630 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Igfbp7Q61581 281 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Tdpoz3Q717B4 365 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Slc2a12Q8BFW9 622 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Clptm1lQ8BXA5 539 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Taf10Q8K0H5 218 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Olfr449Q8VGW8 311 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Barhl2Q8VIB5 384 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Mrpl57Q9CQF8 102 aaKnown RBP17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Oser1Q9D722 291 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Ralgps2Q9ERD6 590 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Tubb3Q9ERD7 450 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Plod1Q9R0E2 728 aa17.11■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Igkv5-43A0A0B4J1J2 115 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Ighg3A0A1Y7VJN6 399 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Zscan5bB2RTN3 468 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Gml2G5E8L7 176 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Oaz2O08608 189 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 RfflQ6ZQM0 377 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Gm5591Q8CDK1 855 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Cox18Q8VC74 331 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Rpl34Q9D1R9 117 aaKnown RBP17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Cep83Q9D5R3 692 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 LrgukQ9D5S7 820 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Tdp2Q9JJX7 370 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Ap4b1Q9WV76 738 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Shcbp1Q9Z179 668 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Adamts9E9PUN6 1931 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 FscbA1EGX6 1074 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Tcp11x2A2AEI7 503 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Odc1P00860 461 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 SykP48025 629 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 PolgP54099 1218 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Abce1P61222 599 aaKnown RBP17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Hsdl2Q2TPA8 490 aaKnown RBP17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Rnf180Q3U827 592 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Lcp1Q61233 627 aaKnown RBP17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Fnip1Q68FD7 1165 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Stkld1Q80YS9 662 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Wdr60Q8C761 999 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 ItchQ8C863 864 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 NeproQ8R2U2 564 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Ier5lQ99J55 406 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Fbxo32Q9CPU7 355 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Pak1ip1Q9DCE5 382 aaKnown RBP17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Erap1Q9EQH2 930 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Ebf2O08792 575 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Usp2O88623 613 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 LdlrP35951 862 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Nr2c1Q505F1 590 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Krt32Q62168 407 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Mon1aQ6PDG8 556 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Fam120bQ6RI63 786 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Washc5Q8C2E7 1159 aaKnown RBP17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Oas1dQ8VI95 361 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Rpl17Q9CPR4 184 aaKnown RBP17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Armc9Q9D2I5 817 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 MkksQ9JI70 570 aa17.1■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Akap17bA2A3V1 959 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Lcn6A2AJB9 181 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Akap5D3YVF0 745 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Mkrn2osD3Z393 217 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 9330159F19RikD3Z623 648 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Sema3aO08665 772 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Calb2Q08331 271 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Cd300lgQ1ERP8 331 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 MyorgQ69ZQ1 716 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Cyp2d40Q6P8N9 338 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Ssx9Q6XAS3 170 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Pcid2Q8BFV2 399 aaKnown RBP17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 KyQ8C8H8 661 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Abi1Q8CBW3 481 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Arhgap29Q8CGF1 1266 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Vwa1Q8R2Z5 415 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 PolhQ9JJN0 694 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Ruvbl2Q9WTM5 463 aaKnown RBP17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 9230113P08RikD3YWX3 137 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Adamts14E9PX39 1209 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Cntnap3E9PY62 1287 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 Slc1a6O35544 561 aa17.09■□□□□ 0.33
Sec61a1-201ENSMUST00000032168 AlplP09242 524 aa17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms