RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 IrgqQ8VIM9 583 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slco1a5Q91YY5 670 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lypla2Q9WTL7 231 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kif1aP33173 1695 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 AtrnQ9WU60 1428 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm7682A0A0J9YUM1 481 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ccdc8D3YZV8 685 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mboat4P0C7A3 435 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Scarf2P59222 833 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 4930502E18RikQ14BQ3 236 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 C1orf109Q499E6 217 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Glp2rQ5IXF8 512 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Adora2aQ60613 410 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm9758Q80ZT2 255 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Exoc3l1Q8BI71 739 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ifnl3Q8CGK6 193 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pcdha1Q91Y21 948 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pacsin3Q99JB8 424 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 NgrnQ99KS2 293 aaKnown RBP10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tmem9Q9CR23 183 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dnajb4Q9D832 337 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Abcb9Q9JJ59 762 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 4931408C20RikE9PWP9 1381 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ism1A2ATD1 454 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cd19P25918 547 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cfap52Q5F201 620 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mbtd1Q6P5G3 631 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Q8BH50 245 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mcoln3Q8R4F0 553 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Akr1c20Q8VC77 323 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Prl7c1Q9CRB5 251 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 4930503E14RikQ9D583 177 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tjp3Q9QXY1 905 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ms4a14A0A087WSD2 1232 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ptchd4B9EKX1 904 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Usp17lbE9Q9U0 468 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mtnd3P03899 115 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fcer2P20693 331 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vps26aP40336 327 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mmp14P53690 582 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ugt1a2P70691 533 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mapkapk3Q3UMW7 384 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr325Q5NCD2 326 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tgoln2Q62314 363 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rps9Q6ZWN5 194 aaKnown RBP10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ubp1Q811S7 540 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Sh3rf3Q8C120 878 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ugt3a2Q8JZZ0 523 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 S100pbpQ9D5K4 396 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Efcab9Q9DAM2 216 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Nfat5Q9WV30 1534 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Man1b1A2AJ15 658 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rhox3cA2AWM0 215 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr414E9Q5P8 317 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rhox3hL7MU37 215 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 TyrobpO54885 114 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Hipk1O88904 1210 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 PrkacbP68181 351 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tuba1cP68373 449 aaKnown RBP10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Snai1Q02085 264 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rhox3aQ4TU90 215 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Klra2Q60660 288 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Abcd2Q61285 741 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mrgprb8Q7TN51 330 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Klhl42Q8BFQ9 493 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dhx32Q8BZS9 744 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Leg1Q8C6C9 337 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ppwd1Q8CEC6 646 aaKnown RBP10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kct2Q8K201 259 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rilpl2Q99LE1 197 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Chaf1bQ9D0N7 572 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Capn15Q9JLG8 1095 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Arl10Q9QXJ4 243 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r35E9Q7U8 861 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 RxraP28700 467 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Akt1P31750 480 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Upf3aQ3ULJ3 422 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gpsm1Q6IR34 673 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tcaf3Q6QR59 914 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rbm4Q8C7Q4 361 aaKnown RBP10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rbm4bQ8VE92 357 aaKnown RBP10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dppa5aQ9CQS7 118 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Atg7Q9D906 698 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 SqorQ9R112 450 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Smim17A0A504 109 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Clec4a4Q5YIR8 236 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tlr12Q6QNU9 906 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Elmo3Q8BYZ7 720 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rdh13Q8CEE7 334 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Angel1Q8VCU0 667 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lgals12Q91VD1 314 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fuca2Q99KR8 461 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ddit4Q9D3F7 229 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fam83dQ9D7I8 585 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 NagaQ9QWR8 415 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm21149A0A0G2JFY7 255 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Speer4eK7N6S8 255 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 PrkcqQ02111 707 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Prr7Q3V0I2 269 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Sema4aQ62178 760 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms