RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SELPP16109 830 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 YWHAQP27348 245 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 ITGA9Q13797 1035 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 GRM3Q14832 879 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 PSMD5Q16401 504 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 ANO4Q32M45 955 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 ATG14Q6ZNE5 492 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 PPHLN1Q8NEY8 458 aaKnown RBP21.84■■□□□ 1.09
CLN6-224ENST00000638076 DBF4BQ8NFT6 615 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 MRGPRX2Q96LB1 330 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 PPP1R2P1Q96PQ5 205 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 CADM1Q9BY67 442 aaKnown RBP21.84■■□□□ 1.09
CLN6-224ENST00000638076 ATXN3LQ9H3M9 355 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 PRDM5Q9NQX1 630 aaPredicted RBP21.84■■□□□ 1.09
CLN6-224ENST00000638076 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.84■■□□□ 1.09
CLN6-224ENST00000638076 PLXNA3P51805 1871 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 OR6C75A6NL08 312 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 CPB1P15086 417 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 CDK7P50613 346 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 PREPLQ4J6C6 727 aaPredicted RBP21.84■■□□□ 1.09
CLN6-224ENST00000638076 ZC3HC1Q86WB0 502 aaKnown RBP21.84■■□□□ 1.09
CLN6-224ENST00000638076 MIB1Q86YT6 1006 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 UMODL1-AS1Q8N2C9 162 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 PPP4R1Q8TF05 950 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 CAPNS2Q96L46 248 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 SORT1Q99523 831 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 ZYG11BQ9C0D3 744 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 FNIP2Q9P278 1114 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 HCSTQ9UBK5 93 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 CAPN14A8MX76 684 aa21.83■■□□□ 1.09
CLN6-224ENST00000638076 GYG2O15488 501 aa21.83■■□□□ 1.09
CLN6-224ENST00000638076 CNTN5O94779 1100 aa21.83■■□□□ 1.09
CLN6-224ENST00000638076 EZRP15311 586 aaKnown RBP21.83■■□□□ 1.09
CLN6-224ENST00000638076 ALFQ53S48 1182 aa21.83■■□□□ 1.09
CLN6-224ENST00000638076 ESRP1Q6NXG1 681 aaKnown RBP21.83■■□□□ 1.09
CLN6-224ENST00000638076 POTEHQ6S545 545 aa21.83■■□□□ 1.09
CLN6-224ENST00000638076 RINLQ6ZS11 566 aa21.83■■□□□ 1.09
CLN6-224ENST00000638076 CASD1Q96PB1 797 aa21.83■■□□□ 1.09
CLN6-224ENST00000638076 GPR22Q99680 433 aa21.83■■□□□ 1.09
CLN6-224ENST00000638076 SIKE1Q9BRV8 207 aa21.83■■□□□ 1.09
CLN6-224ENST00000638076 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.83■■□□□ 1.094e-8■■■■□ 25.2
CLN6-224ENST00000638076 ELAC1Q9H777 363 aaKnown RBP21.83■■□□□ 1.09
CLN6-224ENST00000638076 HMX1Q9NP08 348 aaPredicted RBP21.83■■□□□ 1.09
CLN6-224ENST00000638076 BPTFQ12830 3046 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 FAM92AA1XBS5 289 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 VAPBO95292 243 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 PEX11BO96011 259 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 RHOQP17081 205 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 ARRB2P32121 409 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 ALDH18A1P54886 795 aaKnown RBP21.83■■□□□ 1.08
CLN6-224ENST00000638076 TAF10Q12962 218 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 MGAT5BQ3V5L5 792 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 TREML1Q86YW5 311 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 CCDC117Q8IWD4 279 aaPredicted RBP21.83■■□□□ 1.08
CLN6-224ENST00000638076 HMCESQ96FZ2 354 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 RHOJQ9H4E5 214 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.83■■□□□ 1.08
CLN6-224ENST00000638076 MARCH5Q9NX47 278 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 TCAF1Q9Y4C2 921 aa21.83■■□□□ 1.08
CLN6-224ENST00000638076 AHSGP02765 367 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 ALDH2P05091 517 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 SAT1P21673 171 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 HADHAP40939 763 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 GTF2A1P52655 376 aaPredicted RBP21.82■■□□□ 1.08
CLN6-224ENST00000638076 NDST2P52849 883 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 ABCE1P61221 599 aaKnown RBP21.82■■□□□ 1.08
CLN6-224ENST00000638076 GPNMBQ14956 572 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 PCSK7Q16549 785 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 RANBP10Q6VN20 620 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 RAPH1Q70E73 1250 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 ATP6V0D2Q8N8Y2 350 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 SEPT5Q99719 369 aaPredicted RBP21.82■■□□□ 1.08
CLN6-224ENST00000638076 NMRAL1Q9HBL8 299 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 TMEM248Q9NWD8 314 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 CLIC5Q9NZA1 410 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 SLC2A6Q9UGQ3 507 aa21.82■■□□□ 1.08
CLN6-224ENST00000638076 G3V2L1 256 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 J3KR12 359 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 GSC2O15499 205 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 FGFR3P22607 806 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 GABRB3P28472 473 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 CHRNA4P43681 627 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 C10orf120Q5SQS8 335 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 RASIP1Q5U651 963 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 RSPO2Q6UXX9 243 aaPredicted RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 DENND6AQ8IWF6 608 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 CNTN4Q8IWV2 1026 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 CRISPLD1Q9H336 500 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 TLR8Q9NR97 1041 aaKnown RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 PNPOQ9NVS9 261 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 TAS2R1Q9NYW7 299 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 MARCH2Q9P0N8 246 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 MTMR11A4FU01 709 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 RTN3O95197 1032 aaPredicted RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 ATP5BP06576 529 aaKnown RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 ENO1P06733 434 aaKnown RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 SERPINA6P08185 405 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 HMBSP08397 361 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 HAPLN1P10915 354 aaPredicted RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 ARCN1P48444 511 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms