RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 C1orf61Q13536 156 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 PDE1CQ14123 709 aaPredicted RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 PMF1Q6P1K2 205 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 INTS8Q75QN2 995 aaKnown RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 ERN2Q76MJ5 926 aaKnown RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 CHSY1Q86X52 802 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 CIR1Q86X95 450 aaPredicted RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 RBFAQ8N0V3 343 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 SH2D3CQ8N5H7 860 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 TMIEQ8NEW7 156 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 EEF2KMTQ96G04 330 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 PPP1R13BQ96KQ4 1090 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 GFM1Q96RP9 751 aaKnown RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 SLC12A9Q9BXP2 914 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 TCEAL2Q9H3H9 227 aaPredicted RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 PLEKHB1Q9UF11 243 aaPredicted RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 RABGEF1Q9UJ41 708 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 PCDHB11Q9Y5F2 797 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 SPTLC2O15270 562 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 KLRC4O43908 158 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 CD19P15391 556 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 OXCT1P55809 520 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 POLE2P56282 527 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 CCL7P80098 99 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 NUCB2P80303 420 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 PRRT3Q5FWE3 981 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 KRT39Q6A163 491 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 ESRP1Q6NXG1 681 aaKnown RBP18.58■□□□□ 0.56
CLN6-212ENST00000636020 SHC4Q6S5L8 630 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 LINC00301Q8NCQ3 95 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 FEM1AQ9BSK4 669 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 HDAC8Q9BY41 377 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 DYRK4Q9NR20 520 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 PLAAQ9Y263 795 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 FARP1Q9Y4F1 1045 aaPredicted RBP18.58■□□□□ 0.56
CLN6-212ENST00000636020 LOXL2Q9Y4K0 774 aa18.58■□□□□ 0.56
CLN6-212ENST00000636020 SPENQ96T58 3664 aaKnown RBP18.58■□□□□ 0.56
CLN6-212ENST00000636020 ABCA12Q86UK0 2595 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 UNC13CQ8NB66 2214 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 DOPEY1Q5JWR5 2465 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 A0A1W2PQ27 194 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 A0A1W2PQ64 194 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 A0A1W2PQC6 194 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 A0A1W2PQM1 296 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 YY2O15391 372 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 POLR2DO15514 142 aaKnown RBP18.57■□□□□ 0.56
CLN6-212ENST00000636020 ANXA6P08133 673 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 VDRP11473 427 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 KRT13P13646 458 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 ITIH1P19827 911 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 GTF2H1P32780 548 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 RPS21P63220 83 aaKnown RBP18.57■□□□□ 0.56
CLN6-212ENST00000636020 ZC3H12AQ5D1E8 599 aaKnown RBP18.57■□□□□ 0.56
CLN6-212ENST00000636020 OR52K2Q8NGK3 314 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 OR2A12Q8NGT7 310 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 BTN2A3PQ96KV6 586 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 TBATAQ96M53 351 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 TMEM74Q96NL1 305 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 PPP1R9BQ96SB3 815 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 KLF6Q99612 283 aaPredicted RBP18.57■□□□□ 0.56
CLN6-212ENST00000636020 PRMT1Q99873 361 aaKnown RBP18.57■□□□□ 0.56
CLN6-212ENST00000636020 RAB20Q9NX57 234 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 FOXJ2Q9P0K8 574 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 APOBEC3BQ9UH17 382 aaKnown RBP18.57■□□□□ 0.56
CLN6-212ENST00000636020 NAALADL1Q9UQQ1 740 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 TRAF3IP3Q9Y228 551 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 OR51B4Q9Y5P0 310 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 CENPEQ02224 2701 aa18.57■□□□□ 0.56
CLN6-212ENST00000636020 LRRK1Q38SD2 2015 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 TCAF2A6NFQ2 919 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 F5H5T6 163 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 APOEP02649 317 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 PDCP20941 246 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 ETV5P41161 510 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 MCCD1P59942 119 aaPredicted RBP18.56■□□□□ 0.56
CLN6-212ENST00000636020 PFN3P60673 137 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 STK38Q15208 465 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 KIAA1161Q6NSJ0 714 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 LCLAT1Q6UWP7 414 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 TAC4Q86UU9 113 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 SDR16C5Q8N3Y7 309 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 FBXL13Q8NEE6 735 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 USP7Q93009 1102 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 RNF34Q969K3 372 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 CCDC74AQ96AQ1 378 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 FEM1CQ96JP0 617 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 LENG8Q96PV6 779 aaPredicted RBP18.56■□□□□ 0.56
CLN6-212ENST00000636020 LRRC61Q9BV99 259 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 CLPBQ9H078 707 aa18.56■□□□□ 0.56
CLN6-212ENST00000636020 PNMA8BQ9ULN7 279 aaPredicted RBP18.56■□□□□ 0.56
CLN6-212ENST00000636020 LRBAP50851 2863 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 C9orf172C9J069 976 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 FPGTO14772 594 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 CALUO43852 315 aaPredicted RBP18.55■□□□□ 0.56
CLN6-212ENST00000636020 PPP6R2O75170 966 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 FBXO21O94952 628 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 MT-CO1P00395 513 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 PRNPP04156 253 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 SRCP12931 536 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 NOS2P35228 1153 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms