RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 TMIEQ8NEW7 156 aa12.9□□□□□ -0.34
PTPN11-206ENST00000635652 GRIN3AQ8TCU5 1115 aa12.9□□□□□ -0.34
PTPN11-206ENST00000635652 EPS8L1Q8TE68 723 aa12.9□□□□□ -0.34
PTPN11-206ENST00000635652 HNRNPLLQ8WVV9 542 aaKnown RBP12.9□□□□□ -0.34
PTPN11-206ENST00000635652 ZYG11BQ9C0D3 744 aa12.9□□□□□ -0.34
PTPN11-206ENST00000635652 ATP13A1Q9HD20 1204 aa12.9□□□□□ -0.34
PTPN11-206ENST00000635652 IL36AQ9UHA7 158 aa12.9□□□□□ -0.34
PTPN11-206ENST00000635652 TMEM59LQ9UK28 342 aa12.9□□□□□ -0.34
PTPN11-206ENST00000635652 PCDHGA1Q9Y5H4 931 aa12.9□□□□□ -0.34
PTPN11-206ENST00000635652 MYLKQ15746 1914 aa12.9□□□□□ -0.35
PTPN11-206ENST00000635652 BAHCC1Q9P281 2608 aa12.9□□□□□ -0.35
PTPN11-206ENST00000635652 ILVBLA1L0T0 632 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 SDC3O75056 442 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 C1SP09871 688 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 THEGLP0DJG4 465 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 CDK4P11802 303 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 HNF1BP35680 557 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 POLR2FP61218 127 aaKnown RBP12.89□□□□□ -0.35
PTPN11-206ENST00000635652 CAMK2BQ13554 666 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 CDO1Q16878 200 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 COL28A1Q2UY09 1125 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 TRNP1Q6NT89 227 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 NEK5Q6P3R8 708 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 C22orf39Q6P5X5 142 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 DPY19L3Q6ZPD9 716 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 ZNF677Q86XU0 584 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 DRC7Q8IY82 874 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 EMC1Q8N766 993 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 SLC20A1Q8WUM9 679 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 ARRDC3Q96B67 414 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 FZD3Q9NPG1 666 aa12.89□□□□□ -0.35
PTPN11-206ENST00000635652 METTL5Q9NRN9 209 aaKnown RBP12.89□□□□□ -0.35
PTPN11-206ENST00000635652 RNF103O00237 685 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 LEFTY1O75610 366 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
PTPN11-206ENST00000635652 SDC4P31431 198 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 AKT2P31751 481 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 ACADVLP49748 655 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 KLK7P49862 253 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 CLDN6P56747 220 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 CDR2Q01850 454 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 GNA12Q03113 381 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 SLC20A2Q08357 652 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 ZNF284Q2VY69 593 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 ARL13BQ3SXY8 428 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 HS1BP3Q53T59 392 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 FKBP15Q5T1M5 1219 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 SFMBT2Q5VUG0 894 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 RWDD4Q6NW29 188 aaKnown RBP12.88□□□□□ -0.35
PTPN11-206ENST00000635652 ZNF783Q6ZMS7 281 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 ERN2Q76MJ5 926 aaKnown RBP12.88□□□□□ -0.35
PTPN11-206ENST00000635652 ARCQ7LC44 396 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 HORMAD1Q86X24 394 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 ENOX1Q8TC92 643 aaKnown RBP12.88□□□□□ -0.35
PTPN11-206ENST00000635652 RXFP2Q8WXD0 754 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 PPP1R16AQ96I34 528 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 CALN1Q9BXU9 219 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 HDAC8Q9BY41 377 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 NLRC4Q9NPP4 1024 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 FAM207AQ9NSI2 230 aaPredicted RBP12.88□□□□□ -0.35
PTPN11-206ENST00000635652 DKK4Q9UBT3 224 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 OR12D3Q9UGF7 316 aa12.88□□□□□ -0.35
PTPN11-206ENST00000635652 CKMT2P17540 419 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 HNRNPA2B1P22626 353 aaKnown RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 MMP8P22894 467 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 ADRA1BP35368 520 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 SOX5P35711 763 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 SERPINH1P50454 418 aaKnown RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 CLDN2P57739 230 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 ARF5P84085 180 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 TARDBPQ13148 414 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 KRT31Q15323 416 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 C15orf59Q2T9L4 293 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 CCDC14Q49A88 953 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 SEL1L3Q68CR1 1132 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 FBXL19Q6PCT2 694 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 KANSL1Q7Z3B3 1105 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 BNIPLQ7Z465 357 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 RYBPQ8N488 228 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 PCDH20Q8N6Y1 951 aaKnown RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 TMEM145Q8NBT3 493 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 SLC30A5Q8TAD4 765 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 TSC1Q92574 1164 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 PCMTD1Q96MG8 357 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 HEPHQ9BQS7 1158 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 C11orf70Q9BRQ4 267 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 CEP44Q9C0F1 390 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 GANQ9H2C0 597 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 KLHL11Q9NVR0 708 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 HECAQ9UBI9 543 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 PPARGC1AQ9UBK2 798 aaKnown RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 NOCTQ9UK39 431 aaKnown RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 FCF1Q9Y324 198 aaKnown RBP12.87□□□□□ -0.35
PTPN11-206ENST00000635652 WASF2Q9Y6W5 498 aa12.87□□□□□ -0.35
PTPN11-206ENST00000635652 SIGLEC6O43699 453 aa12.86□□□□□ -0.35
PTPN11-206ENST00000635652 ZNF821O75541 412 aaPredicted RBP12.86□□□□□ -0.35
PTPN11-206ENST00000635652 ZMPSTE24O75844 475 aa12.86□□□□□ -0.35
PTPN11-206ENST00000635652 GJB6O95452 261 aa12.86□□□□□ -0.35
PTPN11-206ENST00000635652 CHRNB2P17787 502 aa12.86□□□□□ -0.35
PTPN11-206ENST00000635652 ACVRL1P37023 503 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms