RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 RNF139Q8WU17 664 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 ZDHHC16Q969W1 377 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 ABHD17AQ96GS6 310 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 SPAG5Q96R06 1193 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 CDK5RAP1Q96SZ6 601 aaKnown RBP8.72□□□□□ -1.01
TCF4-258ENST00000627320 KLF6Q99612 283 aaPredicted RBP8.72□□□□□ -1.01
TCF4-258ENST00000627320 TNKS2Q9H2K2 1166 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 SEMA6CQ9H3T2 930 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 CCDC39Q9UFE4 941 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 APOBEC3BQ9UH17 382 aaKnown RBP8.72□□□□□ -1.01
TCF4-258ENST00000627320 TSPAN16Q9UKR8 245 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 ACSL6Q9UKU0 697 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 PADI4Q9UM07 663 aa8.72□□□□□ -1.01
TCF4-258ENST00000627320 PRRC2CQ9Y520 2896 aaKnown RBP8.72□□□□□ -1.01
TCF4-258ENST00000627320 NEMP2A6NFY4 417 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 SLC7A4O43246 635 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 SNAP91O60641 907 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 PDGFAP04085 211 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 PRKCGP05129 697 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 PRF1P14222 555 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 TSHRP16473 764 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 RRM1P23921 792 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 OAS2P29728 719 aaKnown RBP8.71□□□□□ -1.02
TCF4-258ENST00000627320 GKP32189 559 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 IGFALSP35858 605 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 ABL2P42684 1182 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 PRR30Q53SZ7 412 aaPredicted RBP8.71□□□□□ -1.02
TCF4-258ENST00000627320 CAPRIN2Q6IMN6 1127 aaKnown RBP8.71□□□□□ -1.02
TCF4-258ENST00000627320 MSANTD2Q6P1R3 559 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 KYAT3Q6YP21 454 aaKnown RBP8.71□□□□□ -1.02
TCF4-258ENST00000627320 DSG4Q86SJ6 1040 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 TAC4Q86UU9 113 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 PARGQ86W56 976 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 PHACTR4Q8IZ21 702 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 UNC5BQ8IZJ1 945 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 C9orf43Q8TAL5 461 aaPredicted RBP8.71□□□□□ -1.02
TCF4-258ENST00000627320 DQX1Q8TE96 717 aaKnown RBP8.71□□□□□ -1.02
TCF4-258ENST00000627320 PDCD6IPQ8WUM4 868 aaKnown RBP8.71□□□□□ -1.02
TCF4-258ENST00000627320 OR8D1Q8WZ84 308 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 NKD1Q969G9 470 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 DHX58Q96C10 678 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 ALG14Q96F25 216 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 EEF2KMTQ96G04 330 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 ZSCAN31Q96LW9 406 aaPredicted RBP8.71□□□□□ -1.02
TCF4-258ENST00000627320 GFM1Q96RP9 751 aaKnown RBP8.71□□□□□ -1.02
TCF4-258ENST00000627320 IL12RB2Q99665 862 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 ZSWIM1Q9BR11 485 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 DUSP23Q9BVJ7 150 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 NIF3L1Q9GZT8 377 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 TMPRSS4Q9NRS4 437 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 SALL4Q9UJQ4 1053 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 KCND3Q9UK17 655 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 NAALADL1Q9UQQ1 740 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 HIVEP1P15822 2718 aa8.71□□□□□ -1.02
TCF4-258ENST00000627320 PRR19A6NJB7 356 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 NVLO15381 856 aaKnown RBP8.7□□□□□ -1.02
TCF4-258ENST00000627320 LATS1O95835 1130 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 SLFN14P0C7P3 912 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 SFTPCP11686 197 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 SRCP12931 536 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 ZNF18P17022 549 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 ITIH2P19823 946 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 TACR2P21452 398 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 CD97P48960 835 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 RIPPLY3P57055 190 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 MPP7Q5T2T1 576 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 SYPL2Q5VXT5 272 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 XKR5Q6UX68 686 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 LINGO4Q6UY18 593 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 CHSY1Q86X52 802 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 CCAR2Q8N163 923 aaKnown RBP8.7□□□□□ -1.02
TCF4-258ENST00000627320 ARHGAP18Q8N392 663 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 TTC13Q8NBP0 860 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 KIAA0895Q8NCT3 520 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 SSC4DQ8WTU2 575 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 MIS12Q9H081 205 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 ADNPQ9H2P0 1102 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 KDM4CQ9H3R0 1056 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 RDH14Q9HBH5 336 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 USP29Q9HBJ7 922 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 CISHQ9NSE2 258 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 OLA1Q9NTK5 396 aaKnown RBP8.7□□□□□ -1.02
TCF4-258ENST00000627320 TFIP11Q9UBB9 837 aaKnown RBP8.7□□□□□ -1.02
TCF4-258ENST00000627320 ANAPC2Q9UJX6 822 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 SRPRBQ9Y5M8 271 aaKnown RBP8.7□□□□□ -1.02
TCF4-258ENST00000627320 SNX10Q9Y5X0 201 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 MRPS18BQ9Y676 258 aaKnown RBP8.7□□□□□ -1.02
TCF4-258ENST00000627320 RNF215Q9Y6U7 377 aa8.7□□□□□ -1.02
TCF4-258ENST00000627320 VPS37CA5D8V6 355 aaPredicted RBP8.69□□□□□ -1.02
TCF4-258ENST00000627320 IGLON5A6NGN9 336 aa8.69□□□□□ -1.02
TCF4-258ENST00000627320 C1QTNF3-AMACRE9PGA6 284 aa8.69□□□□□ -1.02
TCF4-258ENST00000627320 XPO1O14980 1071 aaKnown RBP8.69□□□□□ -1.02
TCF4-258ENST00000627320 MCF2LO15068 1137 aa8.69□□□□□ -1.02
TCF4-258ENST00000627320 SNPHO15079 494 aa8.69□□□□□ -1.02
TCF4-258ENST00000627320 P4HA1P13674 534 aa8.69□□□□□ -1.02
TCF4-258ENST00000627320 SLC11A2P49281 568 aa8.69□□□□□ -1.02
TCF4-258ENST00000627320 MRPL49Q13405 166 aaKnown RBP8.69□□□□□ -1.02
TCF4-258ENST00000627320 CUL4BQ13620 913 aa8.69□□□□□ -1.02
TCF4-258ENST00000627320 DEFB109BQ30KR1 87 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms