RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 CNTD1Q8N815 330 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 ZNF557Q8N988 423 aaPredicted RBP7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 TDRD5Q8NAT2 981 aaKnown RBP7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 FBXO36Q8NEA4 188 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 TTC16Q8NEE8 873 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 VN1R2Q8NFZ6 395 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 USP33Q8TEY7 942 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 DDI1Q8WTU0 396 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 USP13Q92995 863 aaPredicted RBP7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 PABPC5Q96DU9 382 aaKnown RBP7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 C9orf72Q96LT7 481 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 NAT9Q9BTE0 207 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 MUC3BQ9H195 1237 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 SLC25A51Q9H1U9 297 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 VPS37BQ9H9H4 285 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 ATP13A1Q9HD20 1204 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 VPS45Q9NRW7 570 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 UBA2Q9UBT2 640 aaPredicted RBP7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 TEX264Q9Y6I9 313 aa7.68□□□□□ -1.18
PTP4A1-206ENST00000627002 COL6A3P12111 3177 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 TMEM265A0A087WTH1 108 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 A0A0D9SEW6 157 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 CXorf51AA0A1B0GTR3 108 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 SDR42E2A6NKP2 422 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 HMGB1P1B2RPK0 211 aaPredicted RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 F5H423 210 aaPredicted RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 H3BQF6 201 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 TNFRSF10AO00220 468 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 RASGRF2O14827 1237 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 CPP00450 1065 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 SHBGP04278 402 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 HOXB8P17481 243 aaPredicted RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 CES1P23141 567 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 FSHRP23945 695 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 HOXD9P28356 352 aaPredicted RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 OAS2P29728 719 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 STX2P32856 288 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ACVRL1P37023 503 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ELK3P41970 407 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 NPY2RP49146 381 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 GEMIN4P57678 1058 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 CDH17Q12864 832 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 MPP3Q13368 585 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 SLC12A1Q13621 1099 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ZNF235Q14590 738 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 FASTKD3Q14CZ7 662 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 SLC14A2Q15849 920 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ZNF77Q15935 545 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 KLHL38Q2WGJ6 581 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 MSS51Q4VC12 460 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 TJAP1Q5JTD0 557 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 RARS2Q5T160 578 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 SYCP2LQ5T4T6 812 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 AGBL2Q5U5Z8 902 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ARMC3Q5W041 872 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 RNF43Q68DV7 783 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 TMC5Q6UXY8 1006 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ZNF534Q76KX8 674 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 OTOP3Q7RTS5 596 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 GPR149Q86SP6 731 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ANKMY2Q8IV38 441 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 PLPP6Q8IY26 295 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 RIBC1Q8N443 379 aaPredicted RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 CELF5Q8N6W0 485 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 C12orf76Q8N812 135 aaPredicted RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 DNAAF3Q8N9W5 541 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 OR7D4Q8NG98 312 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 OR2W6PQ8NHA6 318 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 FIBINQ8TAL6 211 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ITFG1Q8TB96 612 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 MYLIPQ8WY64 445 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ING5Q8WYH8 240 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 IMP4Q96G21 291 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 EBNA1BP2Q99848 306 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 GORASP1Q9BQQ3 440 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 SPON2Q9BUD6 331 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 C2orf49Q9BVC5 232 aaPredicted RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ACE2Q9BYF1 805 aaPredicted RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 POLR1EQ9GZS1 481 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 SMG9Q9H0W8 520 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 STMN4Q9H169 189 aaPredicted RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 IGFLR1Q9H665 355 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 PDFQ9HBH1 243 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 TMBIM4Q9HC24 238 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 LRRC4CQ9HCJ2 640 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 NT5MQ9NPB1 228 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 CASS4Q9NQ75 786 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 GDE1Q9NZC3 331 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 BFARQ9NZS9 450 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 LMCD1Q9NZU5 365 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 SEPT3Q9UH03 358 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 CCL26Q9Y258 94 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 TTLL3Q9Y4R7 772 aa7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.67□□□□□ -1.18
PTP4A1-206ENST00000627002 ZNF638Q14966 1978 aaKnown RBP7.66□□□□□ -1.18
PTP4A1-206ENST00000627002 MAGEB16A2A368 324 aa7.66□□□□□ -1.18
PTP4A1-206ENST00000627002 CBX4O00257 560 aa7.66□□□□□ -1.18
PTP4A1-206ENST00000627002 RFXAPO00287 272 aa7.66□□□□□ -1.18
PTP4A1-206ENST00000627002 RGS16O15492 202 aaPredicted RBP7.66□□□□□ -1.18
PTP4A1-206ENST00000627002 RNF40O75150 1001 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms