RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ETV4P43268 484 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 PDE1BQ01064 536 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 IFT88Q13099 833 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 PPIGQ13427 754 aaKnown RBP eCLIP16.62■□□□□ 0.25
LDB3-208ENST00000623007 SLC1A5Q15758 541 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 ADGRF1Q5T601 910 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 RANBP10Q6VN20 620 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 CCDC149Q6ZUS6 474 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 ZNF354CQ86Y25 554 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 LMNTD2Q8IXW0 634 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 CALML6Q8TD86 181 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 VWCEQ96DN2 955 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 HMCESQ96FZ2 354 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 POLR1EQ9GZS1 481 aaKnown RBP16.62■□□□□ 0.25
LDB3-208ENST00000623007 MANSC1Q9H8J5 431 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 MID2Q9UJV3 735 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 STOML2Q9UJZ1 356 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 MRPL42Q9Y6G3 142 aaKnown RBP16.62■□□□□ 0.25
LDB3-208ENST00000623007 ZCWPW2A0A1B0GU75 182 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 ILVBLA1L0T0 632 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 C2CD2LO14523 706 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 ATP9BO43861 1147 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 PRAMEF11O60813 436 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 EDF1O60869 148 aaKnown RBP16.61■□□□□ 0.25
LDB3-208ENST00000623007 C1RP00736 705 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 MPOP05164 745 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 ITGA2BP08514 1039 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 NEFHP12036 1026 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 SERPINB8P50452 374 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 ALFQ53S48 1182 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 RNF43Q68DV7 783 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 ARHGAP36Q6ZRI8 547 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 OTOP3Q7RTS5 596 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 TFAP2DQ7Z6R9 452 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 KCNMB4Q86W47 210 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 LGI2Q8N0V4 545 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 FIBCD1Q8N539 461 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 IPMKQ8NFU5 416 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 USP33Q8TEY7 942 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 ZNF75CPQ92670 426 aaPredicted RBP16.61■□□□□ 0.25
LDB3-208ENST00000623007 IGSF8Q969P0 613 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 RBBP8Q99708 897 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 FAM167BQ9BTA0 163 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 MLXIPLQ9NP71 852 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 NDFIP2Q9NV92 336 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 PRKAG2Q9UGJ0 569 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 PRDM4Q9UKN5 801 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 PHTF1Q9UMS5 762 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 ZNF510Q9Y2H8 683 aa16.61■□□□□ 0.25
LDB3-208ENST00000623007 A0A1B0GVM2 712 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 TCAF2A6NFQ2 919 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 CCT8L1PA6NM43 557 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 FOXO6A8MYZ6 492 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 F5H423 210 aaPredicted RBP16.6■□□□□ 0.25
LDB3-208ENST00000623007 COCHO43405 550 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 TGDSO95455 350 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 SEC24AO95486 1093 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 PEX11BO96011 259 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 HMBSP08397 361 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 CTSAP10619 480 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 RPL17P18621 184 aaKnown RBP16.6■□□□□ 0.25
LDB3-208ENST00000623007 LIMK2P53671 638 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 CRADDP78560 199 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 ZNF235Q14590 738 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 LBRQ14739 615 aaKnown RBP16.6■□□□□ 0.25
LDB3-208ENST00000623007 LACTB2Q53H82 288 aaPredicted RBP16.6■□□□□ 0.25
LDB3-208ENST00000623007 MROH9Q5TGP6 573 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 ALG1LQ6GMV1 187 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 CNTN4Q8IWV2 1026 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 NDUFAF2Q8N183 169 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 SREK1Q8WXA9 508 aaKnown RBP16.6■□□□□ 0.25
LDB3-208ENST00000623007 RWDD3Q9Y3V2 267 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 TCAF1Q9Y4C2 921 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 INSL6Q9Y581 213 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 INSL5Q9Y5Q6 135 aa16.6■□□□□ 0.25
LDB3-208ENST00000623007 NYNRINQ9P2P1 1898 aaKnown RBP16.6■□□□□ 0.25
LDB3-208ENST00000623007 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 GOLGA8RI6L899 631 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 USP12O75317 370 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 FGF19O95750 216 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 FOXN2P32314 431 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 SERPINB4P48594 390 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 DEFB103AP81534 67 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 GNA12Q03113 381 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 CCDC15Q0P6D6 951 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 ZNF177Q13360 481 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 CCDC153Q494R4 210 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 RNF187Q5TA31 235 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 KIAA0930Q6ICG6 404 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 KIAA0408Q6ZU52 694 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 TRPM8Q7Z2W7 1104 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 CCDC91Q7Z6B0 441 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 DNAJB7Q7Z6W7 309 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 ELMOD1Q8N336 334 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 SPOCK2Q92563 424 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 PABPC5Q96DU9 382 aaKnown RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 FICDQ9BVA6 458 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 ATP13A1Q9HD20 1204 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 C20orf96Q9NUD7 363 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 SEPT3Q9UH03 358 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms