RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 INO80DQ53TQ3 878 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 DARS2Q6PI48 645 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 PRSS33Q8NF86 280 aa20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 LRRN4Q8WUT4 740 aa20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 UCMAQ8WVF2 138 aa20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 CASKIN2Q8WXE0 1202 aa20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 MAGOHBQ96A72 148 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 IER2Q9BTL4 223 aa20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 UBA2Q9UBT2 640 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 SLC25A13Q9UJS0 675 aa20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 DRG1Q9Y295 367 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-221ENST00000622702 CFAP69A5D8W1 941 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 ITGAVP06756 1048 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 SRPRAP08240 638 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 VAV1P15498 845 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 SERPINH1P50454 418 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 SEC13P55735 322 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 SNX1Q13596 522 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 HNRNPDQ14103 355 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 E2F5Q15329 346 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 PTPRNQ16849 979 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 TMCO4Q5TGY1 634 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 HEATR6Q6AI08 1181 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 LINGO4Q6UY18 593 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 METTL3Q86U44 580 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 KDM1BQ8NB78 822 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 SPATA4Q8NEY3 305 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 HTR3CQ8WXA8 447 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 MRGPRX3Q96LB0 322 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 KCNH6Q9H252 994 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 L2HGDHQ9H9P8 463 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 USP29Q9HBJ7 922 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 ERVW-1Q9UQF0 538 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 SHROOM3Q8TF72 1996 aa20.2■□□□□ 0.82
PDLIM2-221ENST00000622702 MYO18AQ92614 2054 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 ANTXRLA6NF34 631 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 LAMTOR5O43504 91 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 MT-CO1P00395 513 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 CHRM1P11229 460 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 RBL1P28749 1068 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 CHRNA3P32297 505 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 FNTAP49354 379 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 CLCN6P51797 869 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 IFI35P80217 286 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 ANGPT1Q15389 498 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 PKN3Q6P5Z2 889 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 B4GALNT4Q76KP1 1039 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 SPEM1Q8N4L4 309 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 TEX26Q8N6G2 289 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 RPLP0P6Q8NHW5 317 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 CCDC26Q8TAB7 109 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 KCNV2Q8TDN2 545 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 CYB5D2Q8WUJ1 264 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 NSMCE1Q8WV22 266 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 SORCS1Q8WY21 1168 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 MYO19Q96H55 970 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 FERMT1Q9BQL6 677 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 HCN2Q9UL51 889 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 ZNF148Q9UQR1 794 aa20.19■□□□□ 0.82
PDLIM2-221ENST00000622702 CACNA1IQ9P0X4 2223 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 KCNK1O00180 336 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 NPC1O15118 1278 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 CCNB1P14635 433 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 HNRNPLP14866 589 aaKnown RBP eCLIP20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 STIP1P31948 543 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 COILP38432 576 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 KIR2DL1P43626 348 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 STK19P49842 368 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 RENBPP51606 427 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 C2orf27AQ580R0 203 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 TTC27Q6P3X3 843 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 LEKR1Q6ZMV7 388 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 MAMSTRQ6ZN01 415 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 SH2D3CQ8N5H7 860 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 RPL10LQ96L21 214 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 IL12RB2Q99665 862 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 TMEM121Q9BTD3 319 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 C10orf88Q9H8K7 445 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 THAP10Q9P2Z0 257 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 PLA2G4CQ9UP65 541 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 ACTL7AQ9Y615 435 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 H0Y858 1186 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 ATP9BO43861 1147 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 ATG13O75143 517 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 TMCC1O94876 653 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 SRCP12931 536 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 NNMTP40261 264 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 CCR3P51677 355 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 SLC10A7Q0GE19 358 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 WASHC5Q12768 1159 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 TCF15Q12870 199 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 LBRQ14739 615 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 EMC10Q5UCC4 262 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 MARC1Q5VT66 337 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 MAML2Q8IZL2 1156 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 ATP11CQ8NB49 1132 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 MNS1Q8NEH6 495 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 ATL2Q8NHH9 583 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 USP33Q8TEY7 942 aa20.18■□□□□ 0.82
PDLIM2-221ENST00000622702 RTP4Q96DX8 246 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms