RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 COL1A1P02452 1464 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 KRT8P05787 483 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 FCGR1AP12314 374 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 MYL4P12829 197 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 NELFEP18615 380 aaKnown RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 ARL2P36404 184 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 SH3PXD2AQ5TCZ1 1133 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 C9orf57Q5W0N0 161 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 GSC2O15499 205 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 MFSD11O43934 449 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 HS6ST1O60243 411 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 CYP1A1P04798 512 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 DDX5P17844 614 aaKnown RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 GRM5P41594 1212 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 RABGGTBP53611 331 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 NRLP54845 237 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 RAB10P61026 200 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 GPSM1Q86YR5 675 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 NMRK1Q9NWW6 199 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 SLC25A13Q9UJS0 675 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 SLC27A5Q9Y2P5 690 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 XRN1Q8IZH2 1706 aaKnown RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 DLGAP3O95886 979 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 ATP5BP06576 529 aaKnown RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 PSMB9P28065 219 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 SERPINB1P30740 379 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 RINLQ6ZS11 566 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 KLHL5Q96PQ7 755 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 KCTD15Q96SI1 283 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 NR2E3Q9Y5X4 410 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 RGSL1A5PLK6 1076 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 RAD51BO15315 384 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 URODP06132 367 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 ALOX15P16050 662 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 SLC20A2Q08357 652 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 SPIRE1Q08AE8 756 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 C16orf72Q14CZ0 275 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 LPCAT4Q643R3 524 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 HERC6Q8IVU3 1022 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 BDH2Q9BUT1 245 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 HDAC3O15379 428 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 BRCC3P46736 316 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 CDH13P55290 713 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 PSME3P61289 254 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 WASHC5Q12768 1159 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 AMIGO2Q86SJ2 522 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 TPD52L3Q96J77 140 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 DHX33Q9H6R0 707 aaKnown RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 PLIN4Q96Q06 1357 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ARHGEF9O43307 516 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ATP5F1P24539 256 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 PEX6Q13608 980 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 PDK3Q15120 406 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 DDR2Q16832 855 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 LCLAT1Q6UWP7 414 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 TSHZ1Q6ZSZ6 1077 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 OTOP3Q7RTS5 596 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 NECAB2Q7Z6G3 386 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 DUSP16Q9BY84 665 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 GRIN2DO15399 1336 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 BIRC5O15392 142 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 TCF4P15884 667 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ABL2P42684 1182 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 RFX3P48380 749 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 PPIDQ08752 370 aaKnown RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 SLC4A11Q8NBS3 891 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 MAGEE2Q8TD90 523 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 SEPT8Q92599 483 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 NKD2Q969F2 451 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 NPAS2Q99743 824 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 PAIP1Q9H074 479 aaKnown RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ST6GALNAC4Q9H4F1 302 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 CLIC5Q9NZA1 410 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 H2AFY2Q9P0M6 372 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 SORCS3Q9UPU3 1222 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 C1orf232A0A0U1RR37 186 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 MSI1O43347 362 aaKnown RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 SNUPNO95149 360 aaKnown RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ETS2P15036 469 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 MPSTP25325 297 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 MAPK1P28482 360 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 KPNA1P52294 538 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 SLC16A1P53985 500 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 EPHB3P54753 998 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 CSTF3Q12996 717 aaKnown RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ATP1A4Q13733 1029 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 GALNT3Q14435 633 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 LACTB2Q53H82 288 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 FBXO30Q8TB52 745 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ZNF516Q92618 1163 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 SEMA3CQ99985 751 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 CYLDQ9NQC7 956 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ZDHHC18Q9NUE0 388 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 PQBP1O60828 265 aaKnown RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ZNF7P17097 686 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ATP6V1C1P21283 382 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms