RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 LRRC49Q8IUZ0 686 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 HOMEZQ8IX15 550 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 RNF169Q8NCN4 708 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 FAM156AQ8NDB6 213 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 KLHDC9Q8NEP7 349 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MRPL1Q9BYD6 325 aaKnown RBP11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ATXN10Q9UBB4 475 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 WASH4PA8MWX3 477 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CLPTM1O96005 669 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 RARBP10826 455 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ODC1P11926 461 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 RPL10P27635 214 aaKnown RBP11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MRPS22P82650 360 aaKnown RBP11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CNGA3Q16281 694 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 BRMS1LQ5PSV4 323 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CRLF3Q8IUI8 442 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 UNC5BQ8IZJ1 945 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ICA1LQ8NDH6 482 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 E2F7Q96AV8 911 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 LGMNQ99538 433 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 COLEC11Q9BWP8 271 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 C1orf21Q9H246 121 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PRDM12Q9H4Q4 367 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MRM3Q9HC36 420 aaKnown RBP11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 THAP1Q9NVV9 213 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ZNF212Q9UDV6 495 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ADAMTS6Q9UKP5 1117 aa11.05□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 DOCK3Q8IZD9 2030 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TMEM189-UBE2V1I3L0A0 370 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 POLBP06746 335 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ITGA2BP08514 1039 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 SLC10A3P09131 477 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 VCLP18206 1134 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 SERPINB5P36952 375 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ETFBP38117 255 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MANEALQ5VSG8 457 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ITPRIPL1Q6GPH6 555 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TRMT10BQ6PF06 316 aaKnown RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 STKLD1Q8NE28 680 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MAGEB5Q9BZ81 275 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 LRRC40Q9H9A6 602 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ZFYVE28Q9HCC9 887 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 NSMCE4AQ9NXX6 385 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 DNAJC16Q9Y2G8 782 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 A0A0U1RQF3 1178 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 YJEFN3A6XGL0 299 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 I6L893 689 aaPredicted RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 SIN3BO75182 1162 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CSPG5O95196 566 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TM4SF4P48230 202 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 NDUFV1P49821 464 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PGGT1BP53609 377 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ADARP55265 1226 aaKnown RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 C6orf52Q5T4I8 152 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 LZTR1Q8N653 840 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ZNF408Q9H9D4 720 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MIOSQ9NXC5 875 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MFHAS1Q9Y4C4 1052 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 C15orf38-AP3S2A0A0A6YYH1 394 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 DCXO43602 365 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ADAMTS4O75173 837 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PRKCGP05129 697 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MYL4P12829 197 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ERCC2P18074 760 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CCNCP24863 283 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GRK2P25098 689 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GARSP41250 739 aaKnown RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CLCNKBP51801 687 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 HK2P52789 917 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CSE1LP55060 971 aaKnown RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MAP3K7CLP57077 242 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 FOLH1Q04609 750 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ILF2Q12905 390 aaKnown RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CCDC153Q494R4 210 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 HSF5Q4G112 596 aaPredicted RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GDF6Q6KF10 455 aaPredicted RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CES3Q6UWW8 571 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 HFE2Q6ZVN8 426 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ARPINQ7Z6K5 226 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 AMIGO2Q86SJ2 522 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CLEC14AQ86T13 490 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 DEPDC1BQ8WUY9 529 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PTCD2Q8WV60 388 aaKnown RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PPP2R3CQ969Q6 453 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CEP41Q9BYV8 373 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 COPS7BQ9H9Q2 264 aaPredicted RBP11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 EMCNQ9ULC0 261 aa11.04□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 WDR27A2RRH5 827 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CLDN5O00501 218 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ALDOAP04075 364 aaKnown RBP11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MPOP05164 745 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GP5P40197 560 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PITX1P78337 314 aaPredicted RBP11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 BEX3Q00994 111 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ANO4Q32M45 955 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MBLAC2Q68D91 279 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ZNF598Q86UK7 904 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms