RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 NDUFB5O43674 189 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 NBNO60934 754 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 KRT37O76014 449 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 VDRP11473 427 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 LCP1P13796 627 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 STX3Q13277 289 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 KCNJ11Q14654 390 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 LRRC38Q5VT99 294 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 PMF1Q6P1K2 205 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TMEM53Q6P2H8 277 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TMCO2Q7Z6W1 182 aaPredicted RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 PQLC3Q8N755 202 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 LRRC52Q8N7C0 313 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 PCDH19Q8TAB3 1148 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 USP13Q92995 863 aaPredicted RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 ZNF778Q96MU6 729 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 LGMNQ99538 433 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 MED10Q9BTT4 135 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 SSU72Q9NP77 194 aaKnown RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 SAGE1Q9NXZ1 904 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 HESX1Q9UBX0 185 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 NT5C1B-RDH14C9J2C7 533 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TGDSO95455 350 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 DHRS4L1P0CG22 281 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 PAX3P23760 479 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 ARRB2P32121 409 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 OR1G1P47890 313 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 NKX3-2P78367 333 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TLE2Q04725 743 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 IFRD2Q12894 506 aaPredicted RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 SLC10A2Q12908 348 aaPredicted RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TRIM60Q495X7 471 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 SV2CQ496J9 727 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 DNAL1Q4LDG9 190 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 N4BP2L1Q5TBK1 243 aaPredicted RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 CTU1Q7Z7A3 348 aaKnown RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TTC30AQ86WT1 665 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 PHTF2Q8N3S3 785 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 APOL2Q9BQE5 337 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 RHOBTB2Q9BYZ6 727 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 PAIP1Q9H074 479 aaKnown RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 CAB39LQ9H9S4 337 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 CHST12Q9NRB3 414 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 WBP1LQ9NX94 342 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 DERAQ9Y315 318 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TMEM221A6NGB7 291 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 E7ESA3 106 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 AIM2O14862 343 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 B4GALT3O60512 393 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 CRTAMO95727 393 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 ERVK-10P10266 1014 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 IL4RP24394 825 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 PKNOX1P55347 436 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 PRAMEP78395 509 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 DLG2Q15700 870 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TIGD5Q53EQ6 642 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 CCDC92Q53HC0 331 aaPredicted RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 OGFOD2Q6N063 350 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 LPCAT2Q7L5N7 544 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 ZSCAN18Q8TBC5 510 aaPredicted RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 LINC01599Q8WXQ3 324 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 CCT7Q99832 543 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TSEN34Q9BSV6 310 aaKnown RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 VRTNQ9H8Y1 702 aa11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 PRDM5Q9NQX1 630 aaPredicted RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 HBS1LQ9Y450 684 aaKnown RBP11.97□□□□□ -0.49
PPP4R3B-204ENST00000612688 TPP1O14773 563 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 DCXO43602 365 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 HOXD12P35452 270 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 GPD2P43304 727 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 LBX1P52954 281 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 MYBPC1Q00872 1141 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 NOMO1Q15155 1222 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 C10orf107Q8IVU9 208 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 FAM126BQ8IXS8 530 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 SLC7A5P1Q8MH63 180 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 B3GALT6Q96L58 329 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 LRGUKQ96M69 825 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 WWP1Q9H0M0 922 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 PCDH18Q9HCL0 1135 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 XAB2Q9HCS7 855 aaKnown RBP11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 TRNAU1APQ9NX07 287 aaKnown RBP11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 RRN3Q9NYV6 651 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 CROCCQ5TZA2 2017 aa11.96□□□□□ -0.49
PPP4R3B-204ENST00000612688 ATP9BO43861 1147 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 FKBP6O75344 327 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 SEC24DO94855 1032 aaPredicted RBP11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 CSPG5O95196 566 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 SELPP16109 830 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 GPD1P21695 349 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 TKTP29401 623 aaKnown RBP11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 ETFBP38117 255 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 SLC5A3P53794 718 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 PRMT2P55345 433 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 SLC18A2Q05940 514 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 ITGA9Q13797 1035 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 GRM2Q14416 872 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 HSP90AA5PQ58FG0 334 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 TRAF7Q6Q0C0 670 aa11.96□□□□□ -0.5
PPP4R3B-204ENST00000612688 GLB1LQ6UWU2 654 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms