RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PAQR9Q6ZVX9 377 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 KBTBD6Q86V97 674 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 UNC93AQ86WB7 457 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 LILRA2Q8N149 483 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 PKP2Q99959 881 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 NFKBIZQ9BYH8 718 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 VCX3BQ9H321 246 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 CASTOR2A6NHX0 329 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 KIF3CO14782 793 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 XPO1O14980 1071 aaKnown RBP14.27□□□□□ -0.12
COL6A1-207ENST00000612273 LRIG2O94898 1065 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 FYNP06241 537 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 CTSHP09668 335 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 GABRB3P28472 473 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 ACADSBP45954 432 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 CCNA1P78396 465 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 ITKQ08881 620 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 LAMB3Q13751 1172 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 PPP1R3AQ16821 1122 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 PPWD1Q96BP3 646 aaKnown RBP14.27□□□□□ -0.12
COL6A1-207ENST00000612273 NPY6RQ99463 290 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 NAT9Q9BTE0 207 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 DUSP16Q9BY84 665 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 TRIM8Q9BZR9 551 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 LZTS1Q9Y250 596 aa14.27□□□□□ -0.12
COL6A1-207ENST00000612273 TREHO43280 583 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 DLX3O60479 287 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 CLPTM1O96005 669 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 FAM200BP0CF97 657 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 BEX3Q00994 111 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 OLFML2BQ68BL8 750 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 ANKRD13AQ8IZ07 590 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 OR9I1Q8NGQ6 314 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 DIS3LQ8TF46 1054 aaKnown RBP14.27□□□□□ -0.13
COL6A1-207ENST00000612273 HSFY1Q96LI6 401 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 PAAF1Q9BRP4 392 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 FICDQ9BVA6 458 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 CDYLQ9Y232 598 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 DOCK1Q14185 1865 aa14.27□□□□□ -0.13
COL6A1-207ENST00000612273 RGSL1A5PLK6 1076 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 MATN2O00339 956 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 GLUD2P49448 558 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 GEN1Q17RS7 908 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 ZNF470Q6ECI4 717 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 CRYBG2Q8N1P7 616 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 CNTD1Q8N815 330 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 PPTC7Q8NI37 304 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 EME1Q96AY2 570 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 EPAS1Q99814 870 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 OXSMQ9NWU1 459 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 GNEQ9Y223 722 aaKnown RBP14.26□□□□□ -0.13
COL6A1-207ENST00000612273 DCLK1O15075 740 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 MSI1O43347 362 aaKnown RBP14.26□□□□□ -0.13
COL6A1-207ENST00000612273 GRID2O43424 1007 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 CRTAMO95727 393 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 RANBP1P43487 201 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 SLC12A2P55011 1212 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 PRAMEP78395 509 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 CDKL1Q00532 357 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 ZBTB6Q15916 424 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 DCAF4L1Q3SXM0 396 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 ZNF789Q5FWF6 425 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 MAMDC4Q6UXC1 1216 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 TMEM135Q86UB9 458 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 LRRC52Q8N7C0 313 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 GRIN3AQ8TCU5 1115 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 NAT14Q8WUY8 206 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 JADE3Q92613 823 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 KLHL32Q96NJ5 620 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 RTKNQ9BST9 563 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 LIN28AQ9H9Z2 209 aaKnown RBP14.26□□□□□ -0.13
COL6A1-207ENST00000612273 TRPC7Q9HCX4 862 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 HEMK1Q9Y5R4 338 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-207ENST00000612273 SNAI1O95863 264 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-207ENST00000612273 EPHX2P34913 555 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 MAXP61244 160 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 PCED1BQ96HM7 432 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 SPON1Q9HCB6 807 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 ETAA1Q9NY74 926 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 GIMAP2Q9UG22 337 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 ACOT9Q9Y305 439 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 SNX13Q9Y5W8 968 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 RGPD3A6NKT7 1758 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-207ENST00000612273 RGPD4Q7Z3J3 1758 aa14.26□□□□□ -0.13
COL6A1-207ENST00000612273 ANK1P16157 1881 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 RTN3O95197 1032 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 SLC4A1P02730 911 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 SBK3P0C264 359 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 TAS2R39P59534 338 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 PDAP1Q13442 181 aaKnown RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 DPYSQ14117 519 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 PTK2BQ14289 1009 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 INSCQ1MX18 579 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 RARS2Q5T160 578 aaKnown RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 CLEC6AQ6EIG7 209 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 LINC01465Q8N7H1 131 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 GAD1Q99259 594 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 SERPINI1Q99574 410 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 COLEC11Q9BWP8 271 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 TRPV6Q9H1D0 765 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms