RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 SZT2Q5T011 3432 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 TCRBV9S1A1TA0A576 114 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 E2F8A0AVK6 867 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 H0Y626 953 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 ZNF197O14709 1029 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 KDELR3O43731 214 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 CDH16O75309 829 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 MGAT1P26572 445 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 GCAP28676 217 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 LBRQ14739 615 aaKnown RBP12.52□□□□□ -0.41
CBWD1-220ENST00000612045 FSCBQ5H9T9 825 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 TMCO4Q5TGY1 634 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 RNF219Q5W0B1 726 aaPredicted RBP12.52□□□□□ -0.41
CBWD1-220ENST00000612045 ZNF783Q6ZMS7 281 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 CARNMT1Q8N4J0 409 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 C12orf76Q8N812 135 aaPredicted RBP12.52□□□□□ -0.41
CBWD1-220ENST00000612045 TDRD5Q8NAT2 981 aaKnown RBP12.52□□□□□ -0.41
CBWD1-220ENST00000612045 USP13Q92995 863 aaPredicted RBP12.52□□□□□ -0.41
CBWD1-220ENST00000612045 TLCD1Q96CP7 247 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 XPO6Q96QU8 1125 aaKnown RBP12.52□□□□□ -0.41
CBWD1-220ENST00000612045 MUC3BQ9H195 1237 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 ACSS3Q9H6R3 686 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 PLAC1Q9HBJ0 212 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 ATP13A1Q9HD20 1204 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 TDP1Q9NUW8 608 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 ZMYM5Q9UJ78 669 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 REV3LO60673 3130 aa12.52□□□□□ -0.41
CBWD1-220ENST00000612045 POC1B-GALNT4F8VUJ3 575 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 LUC7L3O95232 432 aaKnown RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 PAPLNO95428 1278 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 AGTP01019 485 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CEBPBP17676 345 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 ETFBP38117 255 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 GEMP55040 296 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 OXCT1P55809 520 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 MAXP61244 160 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 MAGOHP61326 146 aaKnown RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CRADDP78560 199 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 ITKQ08881 620 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 KCNC3Q14003 757 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 KLHL38Q2WGJ6 581 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 TNFAIP8L3Q5GJ75 292 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 NAPEPLDQ6IQ20 393 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CASC4Q6P4E1 433 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 TMC5Q6UXY8 1006 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 UNC5AQ6ZN44 842 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 LINC00523Q86TU6 105 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 PRPF39Q86UA1 669 aaKnown RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 TDRPQ86YL5 185 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 DNAAF3Q8N9W5 541 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 VN1R2Q8NFZ6 395 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 DDI1Q8WTU0 396 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 SMG7Q92540 1137 aaKnown RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 BHMTQ93088 406 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 STAMBPL1Q96FJ0 436 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 IMP4Q96G21 291 aaKnown RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 ZSWIM3Q96MP5 696 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 APOL2Q9BQE5 337 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 STMN4Q9H169 189 aaPredicted RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 PPCSQ9HAB8 311 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 PIDD1Q9HB75 910 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 SYBUQ9NX95 663 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CTNNAL1Q9UBT7 734 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 FETUBQ9UGM5 382 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 LGALS13Q9UHV8 139 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 MRPS23Q9Y3D9 190 aaKnown RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 SPTBN5Q9NRC6 3674 aaKnown RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 AP3B1O00203 1094 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 PRAMEF12O95522 483 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 GSTA2P09210 222 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 NR1D1P20393 614 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 GLDCP23378 1020 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 STX2P32856 288 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 GEMIN4P57678 1058 aaKnown RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 NIPAL4Q0D2K0 466 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CDH17Q12864 832 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 MPP3Q13368 585 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CDH18Q13634 790 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 ZNF235Q14590 738 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 MPPE1Q53F39 396 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 MPP7Q5T2T1 576 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CCNJLQ8IV13 435 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 PGBD5Q8N414 524 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 IPMKQ8NFU5 416 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 GSDMBQ8TAX9 411 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 RIN3Q8TB24 985 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CYTH2Q99418 400 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 TBL1YQ9BQ87 522 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 TRIM56Q9BRZ2 755 aaKnown RBP12.51□□□□□ -0.41
CBWD1-220ENST00000612045 NAT9Q9BTE0 207 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 EURLQ9NYK6 297 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 BFARQ9NZS9 450 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 SLC24A2Q9UI40 661 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 ADAM21Q9UKJ8 722 aa12.51□□□□□ -0.41
CBWD1-220ENST00000612045 CBX4O00257 560 aa12.5□□□□□ -0.41
CBWD1-220ENST00000612045 RFXAPO00287 272 aa12.5□□□□□ -0.41
CBWD1-220ENST00000612045 PMPCBO75439 489 aa12.5□□□□□ -0.41
CBWD1-220ENST00000612045 MMP2P08253 660 aa12.5□□□□□ -0.41
CBWD1-220ENST00000612045 PGAM1P18669 254 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms