RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 J3QKU1 62 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 RIOK3O14730 519 aaKnown RBP18.96■□□□□ 0.63
NECAB3-220ENST00000606699 SLC31A1O15431 190 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 CLDN11O75508 207 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 PIAS2O75928 621 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 USP8P40818 1118 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 RAPGEF1Q13905 1077 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 SYCP1Q15431 976 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 PIP5KL1Q5T9C9 394 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 DENND1BQ6P3S1 775 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 Q6ZVU0 165 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 TMIEQ8NEW7 156 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 SHC3Q92529 594 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 CCDC114Q96M63 670 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 DUSP23Q9BVJ7 150 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 POLR1BQ9H9Y6 1135 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 ASNSD1Q9NWL6 643 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 DDIT4Q9NX09 232 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 VPS28Q9UK41 221 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 HS3ST2Q9Y278 367 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 CA5BQ9Y2D0 317 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 TBC1D30Q9Y2I9 924 aa18.96■□□□□ 0.63
NECAB3-220ENST00000606699 ATMQ13315 3056 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 A0A1W2PQU0 124 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 SCAMP1O15126 338 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 LZTS3O60299 673 aaPredicted RBP18.95■□□□□ 0.62
NECAB3-220ENST00000606699 MPOP05164 745 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 PNMA6AP0CW24 399 aaPredicted RBP18.95■□□□□ 0.62
NECAB3-220ENST00000606699 GIMD1P0DJR0 217 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 HNRNPA2B1P22626 353 aaKnown RBP18.95■□□□□ 0.62
NECAB3-220ENST00000606699 TPM4P67936 248 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 PITX1P78337 314 aaPredicted RBP18.95■□□□□ 0.62
NECAB3-220ENST00000606699 KRT83P78385 493 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 AUHQ13825 339 aaKnown RBP18.95■□□□□ 0.62
NECAB3-220ENST00000606699 ZNF284Q2VY69 593 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 POM121L1PQ3SYA9 428 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 C5orf22Q49AR2 442 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 IGF2-ASQ6U949 168 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 TMC6Q7Z403 805 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 HORMAD1Q86X24 394 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 SNRNP27Q8WVK2 155 aaKnown RBP18.95■□□□□ 0.62
NECAB3-220ENST00000606699 ZNF606Q8WXB4 792 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 GRAMD1AQ96CP6 724 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 PCMTD1Q96MG8 357 aaPredicted RBP18.95■□□□□ 0.62
NECAB3-220ENST00000606699 SLC2A13Q96QE2 648 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 ABCG4Q9H172 646 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 GANQ9H2C0 597 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 FAM204AQ9H8W3 233 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 ACP6Q9NPH0 428 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 FAM207AQ9NSI2 230 aaPredicted RBP18.95■□□□□ 0.62
NECAB3-220ENST00000606699 SIK3Q9Y2K2 1263 aa18.95■□□□□ 0.62
NECAB3-220ENST00000606699 GOLGA6L19H0YKK7 550 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 TEX33O43247 280 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 USP12O75317 370 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 UCHL3P15374 230 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 CHRNA3P32297 505 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 NUMBP49757 651 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 HNRNPKP61978 463 aaKnown RBP eCLIP18.94■□□□□ 0.626e-8■■■■□ 20.9
NECAB3-220ENST00000606699 GABREP78334 506 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 EFHC1Q5JVL4 640 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 ABI3BPQ7Z7G0 1075 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 OR13H1Q8NG92 308 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 OR52K2Q8NGK3 314 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 APOLD1Q96LR9 279 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 PLCB1Q9NQ66 1216 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 RTN4Q9NQC3 1192 aaKnown RBP18.94■□□□□ 0.62
NECAB3-220ENST00000606699 DYRK4Q9NR20 520 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 NCKIPSDQ9NZQ3 722 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 HS3ST3A1Q9Y663 406 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 NYNRINQ9P2P1 1898 aaKnown RBP18.94■□□□□ 0.62
NECAB3-220ENST00000606699 COL6A6A6NMZ7 2263 aa18.94■□□□□ 0.62
NECAB3-220ENST00000606699 FOXN3O00409 490 aaPredicted RBP18.93■□□□□ 0.62
NECAB3-220ENST00000606699 EPHB6O15197 1021 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 FFAR2O15552 330 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 PRNPP04156 253 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 CTSLP07711 333 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 SRCP12931 536 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 PRLRP16471 622 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 CDH4P55283 916 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 CENPCQ03188 943 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 PDCLQ13371 301 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 DRAP1Q14919 205 aaPredicted RBP18.93■□□□□ 0.62
NECAB3-220ENST00000606699 TAF5Q15542 800 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 DEFB106AQ8N104 65 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 OR2A12Q8NGT7 310 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 KCNE4Q8WWG9 221 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 NAF1Q96HR8 494 aaKnown RBP18.93■□□□□ 0.62
NECAB3-220ENST00000606699 NAP1L5Q96NT1 182 aaPredicted RBP18.93■□□□□ 0.62
NECAB3-220ENST00000606699 ERGIC2Q96RQ1 377 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 C2orf49Q9BVC5 232 aaPredicted RBP18.93■□□□□ 0.62
NECAB3-220ENST00000606699 NAA15Q9BXJ9 866 aaKnown RBP18.93■□□□□ 0.62
NECAB3-220ENST00000606699 CALN1Q9BXU9 219 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 HDAC8Q9BY41 377 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 THSD1Q9NS62 852 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 VANGL2Q9ULK5 521 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 SSUH2Q9Y2M2 353 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 TENM4Q6N022 2769 aa18.93■□□□□ 0.62
NECAB3-220ENST00000606699 KPNA3O00505 521 aaPredicted RBP18.92■□□□□ 0.62
NECAB3-220ENST00000606699 THAP12O43422 761 aa18.92■□□□□ 0.62
NECAB3-220ENST00000606699 BNIP3LO60238 219 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms