RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SELENOSQ9BQE4 189 aa17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 BRD8Q9H0E9 1235 aa17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 SHROOM3Q8TF72 1996 aa17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 ARHGAP42A6NI28 874 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 LUC7L3O95232 432 aaKnown RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 HLA-DQB2P05538 268 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 CCNB1P14635 433 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 NFKB1P19838 968 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 MLLT1Q03111 559 aaPredicted RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 CTC1Q2NKJ3 1217 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 PARP15Q460N3 678 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 FYB2Q5VWT5 728 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 TRMT10CQ7L0Y3 403 aaKnown RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 OTOP3Q7RTS5 596 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 TMEM25Q86YD3 366 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 PPIL6Q8IXY8 311 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 DDI1Q8WTU0 396 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 PABPC5Q96DU9 382 aaKnown RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 ASB16Q96NS5 453 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 WDR83Q9BRX9 315 aaKnown RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 STMN4Q9H169 189 aaPredicted RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 S1PR5Q9H228 398 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 SHOC2Q9UQ13 582 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 TBC1D30Q9Y2I9 924 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 UNC80Q8N2C7 3258 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 RASGRF2O14827 1237 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 MATN3O15232 486 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 OPHN1O60890 802 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 IGFBP4P22692 258 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 FCARP24071 287 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 GRIA1P42261 906 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 SLC10A7Q0GE19 358 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 ZNF177Q13360 481 aaPredicted RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 FASTKD3Q14CZ7 662 aaKnown RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 MORF4L2Q15014 288 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 SPRED3Q2MJR0 410 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 MSS51Q4VC12 460 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 TEX44Q53QW1 395 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 TTC39BQ5VTQ0 682 aaPredicted RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 RNF219Q5W0B1 726 aaPredicted RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 TRIM68Q6AZZ1 485 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 PID1Q7Z2X4 250 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 UHMK1Q8TAS1 419 aaKnown RBP17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 MAML1Q92585 1016 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 CCDC134Q9H6E4 229 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 SP110Q9HB58 689 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 PDFQ9HBH1 243 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 TTLL3Q9Y4R7 772 aa17.67■□□□□ 0.42
PPFIA3-207ENST00000602716 SOBPA7XYQ1 873 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 SNAP91O60641 907 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 GJB3O75712 270 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 APRTP07741 180 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 SEMA5AQ13591 1074 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 LACTB2Q53H82 288 aaPredicted RBP17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 HP1BP3Q5SSJ5 553 aaPredicted RBP17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 ZNF534Q76KX8 674 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 AGGF1Q8N302 714 aaeCLIP17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 ZCCHC9Q8N567 271 aaKnown RBP17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 TEKT5Q96M29 485 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 IL12RB2Q99665 862 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 SPON2Q9BUD6 331 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 MLPHQ9BV36 600 aaPredicted RBP17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 ZNF510Q9Y2H8 683 aa17.66■□□□□ 0.42
PPFIA3-207ENST00000602716 H0Y626 953 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 PRAMEF11O60813 436 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 STK10O94804 968 aaKnown RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 ETFBP38117 255 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 CSKP41240 450 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 YBEYP58557 167 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 ZNF33AQ06730 810 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 CDH18Q13634 790 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 FNBP1LQ5T0N5 605 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 RNF43Q68DV7 783 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 IL31Q6EBC2 164 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 MFN1Q8IWA4 741 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 PGBD5Q8N414 524 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 BBOF1Q8ND07 529 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 ZFYVE19Q96K21 471 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 MYADMQ96S97 322 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 ROPN1BQ9BZX4 212 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 GBA3Q9H227 469 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 ROPN1Q9HAT0 212 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 PIH1D1Q9NWS0 290 aaKnown RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 UBP1Q9NZI7 540 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 IGSF9Q9P2J2 1179 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 NUP210Q8TEM1 1887 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 ILVBLA1L0T0 632 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 TTC24A2A3L6 582 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 MUSKO15146 869 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 AVILO75366 819 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 RASSF9O75901 435 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 TCF3P15923 654 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 MAGEA6P43360 314 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 SLCO1A2P46721 670 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 MAXP61244 160 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 SPARCL1Q14515 664 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 ASTLQ6HA08 431 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 SETD3Q86TU7 594 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 CCT6BQ92526 530 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms