RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ARSIQ5FYB1 569 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 DPY19L3Q6ZPD9 716 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 ERN2Q76MJ5 926 aaKnown RBP17.36■□□□□ 0.37
SCAF1-204ENST00000601038 HORMAD1Q86X24 394 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 FAM131BQ86XD5 332 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 SPON2Q9BUD6 331 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 CEP44Q9C0F1 390 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 TNKS2Q9H2K2 1166 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 SCUBE2Q9NQ36 999 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 TAB2Q9NYJ8 693 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 NOCTQ9UK39 431 aaKnown RBP17.36■□□□□ 0.37
SCAF1-204ENST00000601038 FREM2Q5SZK8 3169 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 CXorf51AA0A1B0GTR3 108 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 RNF103O00237 685 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 LEFTY1O75610 366 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 CYP1A1P04798 512 aaPredicted RBP17.35■□□□□ 0.37
SCAF1-204ENST00000601038 HOXB3P14651 431 aaPredicted RBP17.35■□□□□ 0.37
SCAF1-204ENST00000601038 PRLRP16471 622 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 CKMT2P17540 419 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 SERPINH1P50454 418 aaKnown RBP17.35■□□□□ 0.37
SCAF1-204ENST00000601038 ATP11AP98196 1134 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 GNA12Q03113 381 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 COL28A1Q2UY09 1125 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 PCDH20Q8N6Y1 951 aaKnown RBP17.35■□□□□ 0.37
SCAF1-204ENST00000601038 ENOX1Q8TC92 643 aaKnown RBP17.35■□□□□ 0.37
SCAF1-204ENST00000601038 GRIN3AQ8TCU5 1115 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 HNRNPLLQ8WVV9 542 aaKnown RBP17.35■□□□□ 0.37
SCAF1-204ENST00000601038 KLK6Q92876 244 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 PPP1R16AQ96I34 528 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 GANQ9H2C0 597 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 RETREG1Q9H6L5 497 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 ATP13A1Q9HD20 1204 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 METTL5Q9NRN9 209 aaKnown RBP17.35■□□□□ 0.37
SCAF1-204ENST00000601038 KLHL11Q9NVR0 708 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 WASF2Q9Y6W5 498 aa17.35■□□□□ 0.37
SCAF1-204ENST00000601038 SDC3O75056 442 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 GFPT2O94808 682 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 PCDH8O95206 1070 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 THEGLP0DJG4 465 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 HNRNPA2B1P22626 353 aaKnown RBP17.34■□□□□ 0.37
SCAF1-204ENST00000601038 MMP8P22894 467 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 AKT2P31751 481 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 ADRA1BP35368 520 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 ARF5P84085 180 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 CDR2Q01850 454 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 NRG1Q02297 640 aaPredicted RBP17.34■□□□□ 0.37
SCAF1-204ENST00000601038 ARL13BQ3SXY8 428 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 FBXL19Q6PCT2 694 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 ANKRD11Q6UB99 2663 aaPredicted RBP17.34■□□□□ 0.37
SCAF1-204ENST00000601038 SLC25A45Q8N413 288 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 EMC1Q8N766 993 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 FAM174AQ8TBP5 190 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 SLC20A1Q8WUM9 679 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 MYOCQ99972 504 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 HEPHQ9BQS7 1158 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 VPS16Q9H269 839 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 OR12D3Q9UGF7 316 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 ZFR2Q9UPR6 939 aaKnown RBP17.34■□□□□ 0.37
SCAF1-204ENST00000601038 ZFYVE26Q68DK2 2539 aa17.34■□□□□ 0.37
SCAF1-204ENST00000601038 CHRNB2P17787 502 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 ACP1P24666 158 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 ITGB7P26010 798 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 SOX5P35711 763 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 ETFBP38117 255 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 NEK3P51956 506 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 POLR2FP61218 127 aaKnown RBP17.33■□□□□ 0.36
SCAF1-204ENST00000601038 FMO1Q01740 532 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 ZNF211Q13398 564 aaPredicted RBP17.33■□□□□ 0.36
SCAF1-204ENST00000601038 PROX2Q3B8N5 592 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 CCDC14Q49A88 953 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 TMEM259Q4ZIN3 620 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 CARD16Q5EG05 197 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 HES3Q5TGS1 186 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 CDKAL1Q5VV42 579 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 PDZD3Q86UT5 571 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 PLPP6Q8IY26 295 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 DRC7Q8IY82 874 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 RXFP2Q8WXD0 754 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 OSBPL2Q9H1P3 480 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 DAAM1Q9Y4D1 1078 aa17.33■□□□□ 0.36
SCAF1-204ENST00000601038 TRPM6Q9BX84 2022 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 A0A087WV48 116 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 C2CD4BA6NLJ0 364 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 TRIM38O00635 465 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 SIGLEC6O43699 453 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 CD160O95971 181 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 TPM2P07951 284 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 ADRB3P13945 408 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 DGKAP23743 735 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 SDC4P31431 198 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 L1CAMP32004 1257 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 KLK7P49862 253 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 DNA2P51530 1060 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 CLDN6P56747 220 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 JAM2P57087 298 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 RPS21P63220 83 aaKnown RBP17.32■□□□□ 0.36
SCAF1-204ENST00000601038 TARDBPQ13148 414 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCAF1-204ENST00000601038 KRT31Q15323 416 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 CDO1Q16878 200 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 C15orf59Q2T9L4 293 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms