RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 Q6ZSR6 202 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 FAM183BPQ6ZVS7 135 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 ERN2Q76MJ5 926 aaKnown RBP10.2□□□□□ -0.78
LIG1-209ENST00000596104 ENOSF1Q7L5Y1 443 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 SLC26A9Q7LBE3 791 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 DCAF4L2Q8NA75 395 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 ATP11CQ8NB49 1132 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 KCNE4Q8WWG9 221 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 NELFBQ8WX92 580 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 TTC9Q92623 222 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 PPP1R13BQ96KQ4 1090 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 CCDC114Q96M63 670 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 TIGD1Q96MW7 591 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 C2orf49Q9BVC5 232 aaPredicted RBP10.2□□□□□ -0.78
LIG1-209ENST00000596104 DUSP23Q9BVJ7 150 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 HDAC8Q9BY41 377 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 MUC3BQ9H195 1237 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 USP29Q9HBJ7 922 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 PIGVQ9NUD9 493 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
LIG1-209ENST00000596104 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.2□□□□□ -0.78
LIG1-209ENST00000596104 TENM4Q6N022 2769 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 A0A0D9SEW6 157 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 POM121BA6NF01 834 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 NEMP2A6NFY4 417 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 DRGXA6NNA5 263 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 M0QYT0 321 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 RAD51BO15315 384 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 KLK10O43240 276 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 ZNF821O75541 412 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 DAB1O75553 588 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 PCDH8O95206 1070 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 ADCY5O95622 1261 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 GNA14O95837 355 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 CSF2P04141 144 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 ERBB2P04626 1255 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 RHOCP08134 193 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 NME1P15531 152 aaKnown RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 TFE3P19532 575 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 NOS2P35228 1153 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 DUSP3P51452 185 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 VAC14Q08AM6 782 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 PTPN20Q4JDL3 420 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 ARSIQ5FYB1 569 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 LINGO4Q6UY18 593 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 DPY19L3Q6ZPD9 716 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 C11orf57Q6ZUT1 292 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 PTAR1Q7Z6K3 402 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 SETD3Q86TU7 594 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 DCP2Q8IU60 420 aaKnown RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 PASD1Q8IV76 773 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 ELOA2Q8IYF1 753 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 ZNF548Q8NEK5 533 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 ZNF397Q8NF99 534 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 FAM174AQ8TBP5 190 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 IFI44Q8TCB0 444 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 GRIN3AQ8TCU5 1115 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 MAPK15Q8TD08 544 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 PRR11Q96HE9 360 aaPredicted RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 VCPIP1Q96JH7 1222 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 NPY6RQ99463 290 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 DPH1Q9BZG8 443 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 SIK2Q9H0K1 926 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 OSBPL2Q9H1P3 480 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 TNKS2Q9H2K2 1166 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 DYRK4Q9NR20 520 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 THSD1Q9NS62 852 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 DNAJC28Q9NX36 388 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 ARHGEF38Q9NXL2 777 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 KLF15Q9UIH9 416 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 PCDHGC3Q9UN70 934 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 CTNND2Q9UQB3 1225 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 SNX10Q9Y5X0 201 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 HS3ST3A1Q9Y663 406 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 CSNK1G3Q9Y6M4 447 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 WASF2Q9Y6W5 498 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 SHROOM3Q8TF72 1996 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 MYLKQ15746 1914 aa10.19□□□□□ -0.78
LIG1-209ENST00000596104 NYNRINQ9P2P1 1898 aaKnown RBP10.19□□□□□ -0.78
LIG1-209ENST00000596104 IGLV3-10A0A075B6K4 115 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 SPTY2D1-AS1A0A0U1RR47 76 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 BICDL2A1A5D9 508 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 EME2A4GXA9 379 aaPredicted RBP10.18□□□□□ -0.78
LIG1-209ENST00000596104 LEFTY1O75610 366 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 ZMPSTE24O75844 475 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 PAK4O96013 591 aaPredicted RBP10.18□□□□□ -0.78
LIG1-209ENST00000596104 TGM2P21980 687 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 CXCR3P49682 368 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 NEK3P51956 506 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 STX17P56962 302 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 APBA1Q02410 837 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 MORC3Q14149 939 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 CDKN3Q16667 212 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 BRMS1LQ5PSV4 323 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 TPRG1LQ5T0D9 272 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 KIAA1161Q6NSJ0 714 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 ZCCHC8Q6NZY4 707 aaKnown RBP10.18□□□□□ -0.78
LIG1-209ENST00000596104 GUSBP11Q6P575 273 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 TRIM65Q6PJ69 517 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 PARGQ86W56 976 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms