RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SLC27A1Q6PCB7 646 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 ALKAL1Q6UXT8 129 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 CNTN4Q8IWV2 1026 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 ZFP28Q8NHY6 868 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 ATXN7L3BQ96GX2 97 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 FAR2Q96K12 515 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 ZNF597Q96LX8 424 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 FAM210AQ96ND0 272 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 CATSPER2Q96P56 530 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
VRK3-209ENST00000594948 MLPHQ9BV36 600 aaPredicted RBP13.45□□□□□ -0.26
VRK3-209ENST00000594948 NUF2Q9BZD4 464 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 OCEL1Q9H607 264 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 IARS2Q9NSE4 1012 aaKnown RBP13.45□□□□□ -0.26
VRK3-209ENST00000594948 GJA3Q9Y6H8 435 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 C9IYK1 514 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 M0QYT0 321 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 TK2O00142 265 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 ZBTB24O43167 697 aaPredicted RBP13.44□□□□□ -0.26
VRK3-209ENST00000594948 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 ZNF26P17031 533 aaPredicted RBP13.44□□□□□ -0.26
VRK3-209ENST00000594948 ERCC2P18074 760 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 ADRA1BP35368 520 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 DPP6P42658 865 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 KPNA2P52292 529 aaKnown RBP13.44□□□□□ -0.26
VRK3-209ENST00000594948 GJA9P57773 515 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 DNAJB13P59910 316 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 ZNF33AQ06730 810 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 GALNT2Q10471 571 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 CDH17Q12864 832 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 PCBP1Q15365 356 aaKnown RBP eCLIP13.44□□□□□ -0.26
VRK3-209ENST00000594948 DCAF6Q58WW2 860 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 LINC00523Q86TU6 105 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 PIGZQ86VD9 579 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 CCDC117Q8IWD4 279 aaPredicted RBP13.44□□□□□ -0.26
VRK3-209ENST00000594948 PELI3Q8N2H9 469 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 KDM1BQ8NB78 822 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 SLC2A14Q8TDB8 520 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 MFSD3Q96ES6 412 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 KLHL32Q96NJ5 620 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 UHRF1Q96T88 793 aaPredicted RBP13.44□□□□□ -0.26
VRK3-209ENST00000594948 LPIN3Q9BQK8 851 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 OSBPL11Q9BXB4 747 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 DUSP16Q9BY84 665 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 GRIP2Q9C0E4 1043 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.44□□□□□ -0.26
VRK3-209ENST00000594948 HSFX1Q9UBD0 423 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 SLC39A10Q9ULF5 831 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 COPG1Q9Y678 874 aaKnown RBP13.44□□□□□ -0.26
VRK3-209ENST00000594948 SQORQ9Y6N5 450 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 MYLKQ15746 1914 aa13.44□□□□□ -0.26
VRK3-209ENST00000594948 A0A0G2JLL6 359 aaPredicted RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 KCNK1O00180 336 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 XPOTO43592 962 aaKnown RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 SLC35E2BP0CK96 405 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 CCDC166P0CW27 439 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 ZNF23P17027 643 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PSMC3P17980 439 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 CD68P34810 354 aaPredicted RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 NAGLUP54802 743 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PKNOX1P55347 436 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 HPCAP84074 193 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 CDKL1Q00532 357 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 ADIGQ0VDE8 80 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 STX5Q13190 355 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 TRIM25Q14258 630 aaKnown RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 PRPSAP1Q14558 356 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 USP10Q14694 798 aaKnown RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 PPP2R5DQ14738 602 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 CERCAMQ5T4B2 595 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 GADL1Q6ZQY3 521 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 CHSY3Q70JA7 882 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PIWIL4Q7Z3Z4 852 aaKnown RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 PRRT2Q7Z6L0 340 aaPredicted RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 CEP70Q8NHQ1 597 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 AGR3Q8TD06 166 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 EMID1Q96A84 441 aaPredicted RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 FAM149B1Q96BN6 582 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 SCYL1Q96KG9 808 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PPP1R16BQ96T49 567 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PRPF18Q99633 342 aaKnown RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 MRPL1Q9BYD6 325 aaKnown RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 UNC93B1Q9H1C4 597 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 SNTG2Q9NY99 539 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PACSIN3Q9UKS6 424 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 RUVBL2Q9Y230 463 aaKnown RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 ACOT9Q9Y305 439 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 COL4A4P53420 1690 aaPredicted RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 DICER1Q9UPY3 1922 aaKnown RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 SDHDO14521 159 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 CFLARO15519 480 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 CACNG3O60359 315 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 USP12O75317 370 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 CD1EP15812 388 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 WARSP23381 471 aaKnown RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 ALDH3B2P48448 385 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 TUBA4AP68366 448 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PPIL2Q13356 520 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms