RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TAF3Q5VWG9 929 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 TRIM72Q6ZMU5 477 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 RFFLQ8WZ73 363 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 LRIG1Q96JA1 1093 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 CFAP57Q96MR6 1250 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 NRSN2Q9GZP1 204 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 OSBPL2Q9H1P3 480 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 SAMSN1Q9NSI8 373 aaKnown RBP19.27■□□□□ 0.68
CCDC43-205ENST00000592333 HS3ST3A1Q9Y663 406 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 KNTC1P50748 2209 aa19.27■□□□□ 0.67
CCDC43-205ENST00000592333 DOCK4Q8N1I0 1966 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 ADAMTS20P59510 1910 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 A0A1W2PQU0 124 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 K7ERQ8 282 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 CBX4O00257 560 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 RIOK3O14730 519 aaKnown RBP19.26■□□□□ 0.67
CCDC43-205ENST00000592333 SMAD6O43541 496 aaKnown RBP19.26■□□□□ 0.67
CCDC43-205ENST00000592333 AP1G1O43747 822 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 SRGAP2O75044 1071 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 MMEP08473 750 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 MAPKAPK2P49137 400 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 E2F1Q01094 437 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 CDR2Q01850 454 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 GNA12Q03113 381 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 ZNF211Q13398 564 aaPredicted RBP19.26■□□□□ 0.67
CCDC43-205ENST00000592333 ZNF284Q2VY69 593 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 HS1BP3Q53T59 392 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 KIAA1161Q6NSJ0 714 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 FBXL19Q6PCT2 694 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 STRADAQ7RTN6 431 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 TFAP2DQ7Z6R9 452 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 CPA5Q8WXQ8 436 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 NXPE2Q96DL1 559 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 HEPHQ9BQS7 1158 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 ATP13A1Q9HD20 1204 aa19.26■□□□□ 0.67
CCDC43-205ENST00000592333 NOCTQ9UK39 431 aaKnown RBP19.26■□□□□ 0.67
CCDC43-205ENST00000592333 ZNF821O75541 412 aaPredicted RBP19.25■□□□□ 0.67
CCDC43-205ENST00000592333 THEGLP0DJG4 465 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 ITGB7P26010 798 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 SDC4P31431 198 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 L1CAMP32004 1257 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 ADRA1BP35368 520 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 PTPN9P43378 593 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 NEK3P51956 506 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 GSCP56915 257 aaPredicted RBP19.25■□□□□ 0.67
CCDC43-205ENST00000592333 PROX2Q3B8N5 592 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 TMEM259Q4ZIN3 620 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 CARD16Q5EG05 197 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 ARSIQ5FYB1 569 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 NAA35Q5VZE5 725 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 TRNP1Q6NT89 227 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 DPY19L3Q6ZPD9 716 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 ABI3BPQ7Z7G0 1075 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 RAB7BQ96AH8 199 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 ARRDC3Q96B67 414 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 FEM1CQ96JP0 617 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 GANQ9H2C0 597 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 OR12D3Q9UGF7 316 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 RAXQ9Y2V3 346 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 WASF2Q9Y6W5 498 aa19.25■□□□□ 0.67
CCDC43-205ENST00000592333 GOLGA4Q13439 2230 aaKnown RBP19.25■□□□□ 0.67
CCDC43-205ENST00000592333 NBEAQ8NFP9 2946 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 FAM149AA5PLN7 773 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 GOLGA8SH3BPF8 625 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 LEFTY1O75610 366 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 RHOQP17081 205 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 JAM2P57087 298 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 RPS21P63220 83 aaKnown RBP19.24■□□□□ 0.67
CCDC43-205ENST00000592333 DNAJC3Q13217 504 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 RTP5Q14D33 572 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 POM121L1PQ3SYA9 428 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 CCDC157Q569K6 752 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 HSP90AA4PQ58FG1 418 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 FKBP15Q5T1M5 1219 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 MANEALQ5VSG8 457 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 CDKAL1Q5VV42 579 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 LINGO4Q6UY18 593 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 FAM131BQ86XD5 332 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 OR7D4Q8NG98 312 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 ASB12Q8WXK4 309 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 CENPIQ92674 756 aaPredicted RBP19.24■□□□□ 0.67
CCDC43-205ENST00000592333 SPON2Q9BUD6 331 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 MAGEH1Q9H213 219 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 USP29Q9HBJ7 922 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 SNX10Q9Y5X0 201 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 ATRXP46100 2492 aa19.24■□□□□ 0.67
CCDC43-205ENST00000592333 NEMP2A6NFY4 417 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 SLC31A1O15431 190 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 PCDH8O95206 1070 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 SOX5P35711 763 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 ARF5P84085 180 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 PDZD3Q86UT5 571 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 CHST14Q8NCH0 376 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 OR4C6Q8NH72 309 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 METTL5Q9NRN9 209 aaKnown RBP19.23■□□□□ 0.67
CCDC43-205ENST00000592333 TMPRSS4Q9NRS4 437 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 GPR27Q9NS67 375 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 TMEM248Q9NWD8 314 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 HPCAL4Q9UM19 191 aa19.23■□□□□ 0.67
CCDC43-205ENST00000592333 C2CD4BA6NLJ0 364 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms