RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 DDX5P17844 614 aaKnown RBP15.41■□□□□ 0.06
CIRBP-228ENST00000590347 ZBTB41Q5SVQ8 909 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 IFNEQ86WN2 208 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 GATAD2AQ86YP4 633 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 EPHX4Q8IUS5 362 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 PGAM4Q8N0Y7 254 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 SLC43A3Q8NBI5 491 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 OR9I1Q8NGQ6 314 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 OR2T3Q8NH03 318 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 FIG4Q92562 907 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 DMRTB1Q96MA1 342 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 STRA6Q9BX79 667 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 AMNQ9BXJ7 453 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 MROQ9BYG7 248 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 RAD21L1Q9H4I0 556 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 PRDM8Q9NQV8 689 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 SCN9AQ15858 1988 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 MEN1O00255 615 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 EI24O14681 340 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 METTL18O95568 372 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 CDH6P55285 790 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 IMPG1Q17R60 797 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.4■□□□□ 0.06
CIRBP-228ENST00000590347 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
CIRBP-228ENST00000590347 TDRD10Q5VZ19 366 aaKnown RBP15.4■□□□□ 0.06
CIRBP-228ENST00000590347 STYK1Q6J9G0 422 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 SLC39A4Q6P5W5 647 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 SUN5Q8TC36 379 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 VTI1AQ96AJ9 217 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 SGF29Q96ES7 293 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 CAMKK2Q96RR4 588 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 MAGEB5Q9BZ81 275 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 GDAP2Q9NXN4 497 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 FBXO9Q9UK97 447 aaPredicted RBP15.4■□□□□ 0.06
CIRBP-228ENST00000590347 SNAP91O60641 907 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 SNAP29O95721 258 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 DLGAP3O95886 979 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 CXCR2P25025 360 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 MERTKQ12866 999 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 PRPSAP1Q14558 356 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 GPAT2Q6NUI2 795 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 FAM117BQ6P1L5 589 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 SCYL2Q6P3W7 929 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 C4orf22Q6V702 233 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 SPATC1Q76KD6 591 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 ITIH5Q86UX2 942 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 C17orf80Q9BSJ5 609 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 C1orf50Q9BV19 199 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 PIF1Q9H611 641 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 ATP13A3Q9H7F0 1226 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 EFCAB1Q9HAE3 211 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 TUFT1Q9NNX1 390 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 SCUBE2Q9NQ36 999 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 FBXO28Q9NVF7 368 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 EXD2Q9NVH0 621 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 PCDHGA11Q9Y5H2 935 aa15.4■□□□□ 0.06
CIRBP-228ENST00000590347 CLDN25C9JDP6 229 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 USP12O75317 370 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 STAM2O75886 525 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 PIGNO95427 931 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 EGFRP00533 1210 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 GNL1P36915 607 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 IST1P53990 364 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 YBX1P67809 324 aaKnown RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 CYP24A1Q07973 514 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 DGKDQ16760 1214 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 SNAP47Q5SQN1 464 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 BBS12Q6ZW61 710 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 SPPL2CQ8IUH8 684 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 PQLC3Q8N755 202 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 CCNYL1Q8N7R7 359 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 ACVR1CQ8NER5 493 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 OR7G1Q8NGA0 311 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 ZNF486Q96H40 463 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 LRCH3Q96II8 777 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 CITED4Q96RK1 184 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 IFT52Q9Y366 437 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 TCAF2A6NFQ2 919 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 TK2O00142 265 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 TBX3O15119 743 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 MGEA5O60502 916 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 ICMTO60725 284 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 IL7RP16871 459 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 MMP8P22894 467 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 GLDCP23378 1020 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 TGFBR1P36897 503 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 NOVP48745 357 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 ACAP2Q15057 778 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 TBCELQ5QJ74 424 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 PRAMEF18Q5VWM3 479 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 LYPD8Q6UX82 237 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 FAM35AQ86V20 835 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 CCDC60Q8IWA6 550 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 ELMOD1Q8N336 334 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 CCDC17Q96LX7 622 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 GATA5Q9BWX5 397 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 ALOXE3Q9BYJ1 711 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 DDX28Q9NUL7 540 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms