RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 TSPAN15O95858 294 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 ZBED1O96006 694 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 AFPP02771 609 aaKnown RBP8.59□□□□□ -1.03
DNMT1-219ENST00000589349 CYBBP04839 570 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 THBDP07204 575 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 RETP07949 1114 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 SNRPB2P08579 225 aaKnown RBP8.59□□□□□ -1.03
DNMT1-219ENST00000589349 TMEM253P0C7T8 217 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 VDRP11473 427 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 OPRD1P41143 372 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 GRIA2P42262 883 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 KIF11P52732 1056 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 BCAT1P54687 386 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 COG7P83436 770 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 CREB5Q02930 508 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 ADIGQ0VDE8 80 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 BST2Q10589 180 aaKnown RBP8.59□□□□□ -1.03
DNMT1-219ENST00000589349 AASDHQ4L235 1098 aaPredicted RBP8.59□□□□□ -1.03
DNMT1-219ENST00000589349 USP39Q53GS9 565 aaKnown RBP8.59□□□□□ -1.03
DNMT1-219ENST00000589349 COBLL1Q53SF7 1204 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 EOGTQ5NDL2 527 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 EMC10Q5UCC4 262 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 SYT13Q7L8C5 426 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 DGLUCYQ7Z3D6 616 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 WDR5BQ86VZ2 330 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 CPNE8Q86YQ8 564 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 DENND1CQ8IV53 801 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 CAMKK1Q8N5S9 505 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 ALLCQ8N6M5 410 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 ANKRD52Q8NB46 1076 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 TXNDC5Q8NBS9 432 aaKnown RBP8.59□□□□□ -1.03
DNMT1-219ENST00000589349 SLC35C1Q96A29 364 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 OTUB2Q96DC9 234 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 CRACR2AQ9BSW2 395 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 ULBP1Q9BZM6 244 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 MIS12Q9H081 205 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 ARRDC1-AS1Q9H2J1 176 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 NMUR1Q9HB89 426 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 UBE2TQ9NPD8 197 aaPredicted RBP8.59□□□□□ -1.03
DNMT1-219ENST00000589349 OSER1Q9NX31 292 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 MARCH2Q9P0N8 246 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 SIRPGQ9P1W8 387 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 WDR35Q9P2L0 1181 aa8.59□□□□□ -1.03
DNMT1-219ENST00000589349 PKD1L2Q7Z442 2459 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 KIF26AQ9ULI4 1882 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 TEX51A0A1B0GUA7 166 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 TCRBV21S2A2A0A5A6 115 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 HHLA1C9JL84 531 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 K7EQS6 105 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 TULP2O00295 520 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 DCLK1O15075 740 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 TSPAN3O60637 253 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 TULP3O75386 442 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 RHOBTB1O94844 696 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 OLFM2O95897 454 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 CALCAP01258 141 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 SCG5P05408 212 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 MSL3P1P0C860 447 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 TYRP14679 529 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 SDHBP21912 280 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 CORO1AP31146 461 aaKnown RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 HARS2P49590 506 aaKnown RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 YBX1P67809 324 aaKnown RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 MRPS21P82921 87 aaKnown RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 NR1I3Q14994 352 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 ARHGAP44Q17R89 818 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 HSP90AA4PQ58FG1 418 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 SNX30Q5VWJ9 437 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 E4F1Q66K89 784 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 ARHGAP17Q68EM7 881 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 BICRALQ6AI39 1079 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 TTI2Q6NXR4 508 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 CCDC186Q7Z3E2 898 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 TRMT11Q7Z4G4 463 aaKnown RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 KBTBD6Q86V97 674 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 SFTPA1Q8IWL2 248 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 ELOA2Q8IYF1 753 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 CHPFQ8IZ52 775 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 SPATA20Q8TB22 786 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 USP33Q8TEY7 942 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 DDI1Q8WTU0 396 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 GAB3Q8WWW8 586 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 SREK1Q8WXA9 508 aaKnown RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 KAT5Q92993 513 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 WBP2Q969T9 261 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 ZNF669Q96BR6 464 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 FAXDC2Q96IV6 333 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 DCLK3Q9C098 648 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 INTS2Q9H0H0 1204 aaKnown RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 PDCL3Q9H2J4 239 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 PNPLA8Q9NP80 782 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.58□□□□□ -1.044e-6■■■□□ 14.7
DNMT1-219ENST00000589349 IL37Q9NZH6 218 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 KIAA1257Q9ULG3 409 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 ZNF510Q9Y2H8 683 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 MSRB2Q9Y3D2 182 aa8.58□□□□□ -1.04
DNMT1-219ENST00000589349 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.58□□□□□ -1.04
DNMT1-219ENST00000589349 NUDT19A8MXV4 375 aa8.57□□□□□ -1.04
DNMT1-219ENST00000589349 CAPN9O14815 690 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms