RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 PLPP6Q8IY26 295 aa17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 SIX5Q8N196 739 aa17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 CCDC33Q8N5R6 958 aa17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 ALLCQ8N6M5 410 aa17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 PCDH20Q8N6Y1 951 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 IL12RB2Q99665 862 aa17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 FAM118BQ9BPY3 351 aa17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 TMEM121Q9BTD3 319 aa17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 THAP10Q9P2Z0 257 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 SHROOM3Q8TF72 1996 aa17.27■□□□□ 0.36
SCAMP4-211ENST00000588907 C5orf60A6NFR6 353 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 K7EQS6 105 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 KCNK1O00180 336 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 RNF103O00237 685 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 DCXO43602 365 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 TMCC1O94876 653 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 ECEL1O95672 775 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 SRCP12931 536 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 ALADP13716 330 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 VAV1P15498 845 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 TUBB4BP68371 445 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 SIGLEC14Q08ET2 396 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 NSUN2Q08J23 767 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 FNDC3BQ53EP0 1204 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 TEX44Q53QW1 395 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 NAIF1Q69YI7 327 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 SDE2Q6IQ49 451 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 SERPINA13PQ6UXR4 307 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 LINGO4Q6UY18 593 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 MAATS1Q7Z4T9 603 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 ZNF513Q8N8E2 541 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 NETO2Q8NC67 525 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 SPATA13Q96N96 652 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 POLR1EQ9GZS1 481 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 USP29Q9HBJ7 922 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 RBM12Q9NTZ6 932 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 RBM22Q9NW64 420 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 SEPT10Q9P0V9 454 aa17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 KLHL8Q9P2G9 620 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-211ENST00000588907 GCATO75600 419 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 GSRP00390 522 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 EGFP01133 1207 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 PTPN3P26045 913 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 KIR2DL1P43626 348 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 RECQLP46063 649 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 RHOAP61586 193 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 SNRPD1P62314 119 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 SLC10A7Q0GE19 358 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 MESP2Q0VG99 397 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 GRM3Q14832 879 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 PTPRNQ16849 979 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 CCDC70Q6NSX1 233 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 C22orf39Q6P5X5 142 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 FAM71DQ8N9W8 422 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 CYB5D2Q8WUJ1 264 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 EDAQ92838 391 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 MRGPRX3Q96LB0 322 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 TEKT5Q96M29 485 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 GDAP1L1Q96MZ0 367 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 MGME1Q9BQP7 344 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 IER2Q9BTL4 223 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 DDX47Q9H0S4 455 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 FBRSQ9HAH7 460 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 PCDH9Q9HC56 1237 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 FBRSL1Q9HCM7 1045 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 LTB4R2Q9NPC1 389 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 CD320Q9NPF0 282 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 PAK5Q9P286 719 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 SUN2Q9UH99 717 aa17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 FARP1Q9Y4F1 1045 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-211ENST00000588907 EDDM13A0A1B0GTR0 161 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 TARSL2A2RTX5 802 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 KRBA1A5PL33 1030 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 GOLGA6CA6NDK9 693 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 GOLGA6BA6NDN3 693 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 SHISA7A6NL88 538 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 NDC80O14777 642 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 ATG13O75143 517 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 CD160O95971 181 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 IGSF6O95976 241 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 IFNB1P01574 187 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 JCHAINP01591 159 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 GOLGA6DP0CG33 693 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 CTSOP43234 321 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 MAGEA9P43362 315 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 CSNK1DP48730 415 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 DR1Q01658 176 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 WASHC5Q12768 1159 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 ENPP2Q13822 863 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 ZNF234Q14588 700 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 PPP1R7Q15435 360 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 SLC14A2Q15849 920 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 HNRNPA1L2Q32P51 320 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 ACCSLQ4AC99 568 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 ALG1LQ6GMV1 187 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 TTC27Q6P3X3 843 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 ARHGEF18Q6ZSZ5 1173 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 KLHL7Q8IXQ5 586 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 CHPFQ8IZ52 775 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 LRRC45Q96CN5 670 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms