RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NXF3Q9H4D5 531 aaKnown RBP18.88■□□□□ 0.61
DDX39A-206ENST00000587730 ZNF696Q9H7X3 374 aa18.88■□□□□ 0.61
DDX39A-206ENST00000587730 SCN1AP35498 2009 aa18.88■□□□□ 0.61
DDX39A-206ENST00000587730 OTOFQ9HC10 1997 aa18.88■□□□□ 0.61
DDX39A-206ENST00000587730 A0A087X1B8 175 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 SPTLC1O15269 473 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 MPSTP25325 297 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 CYP2C18P33260 490 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 TKTL1P51854 596 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 IRF9Q00978 393 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 PCID2Q5JVF3 399 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 MFSD3Q96ES6 412 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 ATXN7L3BQ96GX2 97 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 SCYL1Q96KG9 808 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 CDRT15Q96T59 188 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 MLPHQ9BV36 600 aaPredicted RBP18.87■□□□□ 0.61
DDX39A-206ENST00000587730 WDR41Q9HAD4 459 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 ADARB2Q9NS39 739 aaKnown RBP18.87■□□□□ 0.61
DDX39A-206ENST00000587730 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.87■□□□□ 0.61
DDX39A-206ENST00000587730 NCKIPSDQ9NZQ3 722 aa18.87■□□□□ 0.61
DDX39A-206ENST00000587730 CAPN8A6NHC0 703 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 GRID2O43424 1007 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 CACNG3O60359 315 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 ANXA9O76027 345 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 CLPTM1O96005 669 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 MMP3P08254 477 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 LRPAP1P30533 357 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 HTR7P34969 479 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 PSMD8P48556 350 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 LILRA4P59901 499 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 DNAJB13P59910 316 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 CREB5Q02930 508 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 DUSP28Q4G0W2 176 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 CLEC20AQ6ZU45 233 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 TICAM1Q8IUC6 712 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 GPRC5AQ8NFJ5 357 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 SHKBP1Q8TBC3 707 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 OPTNQ96CV9 577 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 OXCT2Q9BYC2 517 aaPredicted RBP18.86■□□□□ 0.61
DDX39A-206ENST00000587730 CAB39LQ9H9S4 337 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 WDR6Q9NNW5 1121 aaKnown RBP18.86■□□□□ 0.61
DDX39A-206ENST00000587730 RIMS3Q9UJD0 308 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 SYNJ2BP-COX16A0A087WUM0 186 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 ARHGAP10A1A4S6 786 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 BTBD19C9JJ37 291 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 DNAJA2O60884 412 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 ZMPSTE24O75844 475 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 LTFP02788 710 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 PAMP19021 973 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 NFKB1P19838 968 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 CD68P34810 354 aaPredicted RBP18.86■□□□□ 0.61
DDX39A-206ENST00000587730 RPS6KA3P51812 740 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 THOP1P52888 689 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 DAOAP59103 153 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 RAB10P61026 200 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 NSUN2Q08J23 767 aaKnown RBP eCLIP18.86■□□□□ 0.61
DDX39A-206ENST00000587730 STX5Q13190 355 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 GRM3Q14832 879 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 CERCAMQ5T4B2 595 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 LRRC8EQ6NSJ5 796 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 SPATA24Q86W54 205 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 CEP70Q8NHQ1 597 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 GCNAQ96QF7 691 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 MED10Q9BTT4 135 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 SUDS3Q9H7L9 328 aaPredicted RBP18.86■□□□□ 0.61
DDX39A-206ENST00000587730 COX16Q9P0S2 106 aa18.86■□□□□ 0.61
DDX39A-206ENST00000587730 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.86■□□□□ 0.61
DDX39A-206ENST00000587730 TARM1B6A8C7 271 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 GABRDO14764 452 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 HCRTO43612 131 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 USP12O75317 370 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 SORBS2O94875 1100 aaKnown RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 MYCNP04198 464 aaPredicted RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 PMLP29590 882 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 NAGLUP54802 743 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 TLR1Q15399 786 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 DLG2Q15700 870 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 PSMD5Q16401 504 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 USP41Q3LFD5 358 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 GJC2Q5T442 439 aaPredicted RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 SYPL2Q5VXT5 272 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 PKN3Q6P5Z2 889 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 BORAQ6PGQ7 559 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 DCLRE1AQ6PJP8 1040 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 POTEHQ6S545 545 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 TMEM86AQ8N2M4 240 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 TMEM151AQ8N4L1 468 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 IRGQQ8WZA9 623 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 RCN3Q96D15 328 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 MAELQ96JY0 434 aaKnown RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 PRICKLE1Q96MT3 831 aaPredicted RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 MRPL57Q9BQC6 102 aaKnown RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 MRPL1Q9BYD6 325 aaKnown RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 CXCL16Q9H2A7 254 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 MRPL46Q9H2W6 279 aaKnown RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 WDR55Q9H6Y2 383 aaPredicted RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 CHRAC1Q9NRG0 131 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 RUVBL2Q9Y230 463 aaKnown RBP18.85■□□□□ 0.61
DDX39A-206ENST00000587730 PTCH2Q9Y6C5 1203 aa18.85■□□□□ 0.61
DDX39A-206ENST00000587730 POLR2AP24928 1970 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms