RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-206	ENST00000587509	HNRNPD	Q14103	355 aa	Known RBP	11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	INAVA	Q3KP66	663 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	BOLA3	Q53S33	107 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	NCEH1	Q6PIU2	408 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	SARM1	Q6SZW1	724 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	LINGO4	Q6UY18	593 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	H2AFV	Q71UI9	128 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	PLPP6	Q8IY26	295 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	UMODL1-AS1	Q8N2C9	162 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	RYBP	Q8N488	228 aa	Predicted RBP	11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	NIPA2	Q8N8Q9	360 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	GRIN3A	Q8TCU5	1115 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	ARHGEF2	Q92974	986 aa	Known RBP	11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	ARHGEF26	Q96DR7	871 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	CCDC42	Q96M95	316 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	GDAP1L1	Q96MZ0	367 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	FAM129B	Q96TA1	746 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	SNRNP25	Q9BV90	132 aa	Known RBP	11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	NUP85	Q9BW27	656 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	OSBPL1A	Q9BXW6	950 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	ACE2	Q9BYF1	805 aa	Predicted RBP	11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	THAP2	Q9H0W7	228 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	NEUROG2	Q9H2A3	272 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	TMEM74B	Q9NUR3	256 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	PCSK1N	Q9UHG2	260 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	PPM1H	Q9ULR3	514 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	NEU3	Q9UQ49	428 aa		11.96	□□□□□ -0.49
PRKCSH-206	ENST00000587509	DOCK4	Q8N1I0	1966 aa		11.96	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3D	A0A087WVF3	549 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3I	A0A087WXS9	549 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509		A0A087X0T9	212 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3E	A0A087X179	549 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3K	A0A087X1G2	549 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3L	B9A6J9	549 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	FAM72C	H0Y354	149 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	PLRG1	O43660	514 aa	Known RBP	11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	BUB1	O43683	1085 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	KDELR3	O43731	214 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	MAGEC1	O60732	1142 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	GSR	P00390	522 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	CYP1A2	P05177	515 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3H	P0C7X1	549 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	FAM228B	P0C875	321 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	VAV1	P15498	845 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	MIP	P30301	263 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	SSR1	P43307	286 aa	Known RBP	11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	NEK3	P51956	506 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	GALC	P54803	685 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	RACK1	P63244	317 aa	Known RBP	11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	ARF5	P84085	180 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	GRIK2	Q13002	908 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	SEMA3B	Q13214	749 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	SLC14A1	Q13336	389 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	GRM3	Q14832	879 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	UAP1L1	Q3KQV9	507 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	SETMAR	Q53H47	684 aa	Predicted RBP	11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	RAB6C	Q53S08	254 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	CARD16	Q5EG05	197 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	PPM1J	Q5JR12	505 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	FAM72A	Q5TYM5	149 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3G	Q6DHY5	549 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3C	Q6IPX1	549 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	FAM72D	Q6L9T8	149 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	RFX8	Q6ZV50	586 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	PRPF39	Q86UA1	669 aa	Known RBP	11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	FAM72B	Q86X60	149 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	PYROXD2	Q8N2H3	581 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	MINDY1	Q8N5J2	469 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	AADAT	Q8N5Z0	425 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	LZTR1	Q8N653	840 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	OR2AP1	Q8NGE2	309 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	OR2A12	Q8NGT7	310 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	TEKT4	Q8WW24	435 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	BIRC7	Q96CA5	298 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	HEPH	Q9BQS7	1158 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	RAB6C	Q9H0N0	254 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	SP110	Q9HB58	689 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	HAUS2	Q9NVX0	235 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	CTTNBP2NL	Q9P2B4	639 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	ARHGAP20	Q9P2F6	1191 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	DMTF1	Q9Y222	760 aa		11.95	□□□□□ -0.5
PRKCSH-206	ENST00000587509	GON4L	Q3T8J9	2241 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509		A0A1W2PPC4	97 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	DCDC2B	A2VCK2	349 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	RASA4B	C9J798	803 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	RASA4	O43374	803 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	DFNA5	O60443	496 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	ZMPSTE24	O75844	475 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	IPO7	O95373	1038 aa	Known RBP	11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	MT-CO1	P00395	513 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	CSRP1	P21291	193 aa	Known RBP	11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	GLDC	P23378	1020 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	ITGB7	P26010	798 aa		11.94	□□□□□ -0.5
PRKCSH-206	ENST00000587509	MAOB	P27338	520 aa		11.94	□□□□□ -0.5

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